Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC141557.1-201ENST00000540982 400 ntBASIC3.84□□□□□ -1.79
NEDD1Q8NHV4 AC027176.1-201ENST00000560204 514 ntBASIC3.84□□□□□ -1.79
NEDD1Q8NHV4 AL929325.1-201ENST00000603096 117 ntBASIC3.84□□□□□ -1.79
NEDD1Q8NHV4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.84□□□□□ -1.8
NEDD1Q8NHV4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.84□□□□□ -1.8
NEDD1Q8NHV4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
NEDD1Q8NHV4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 MIR30E-201ENST00000362104 92 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 SNORA27.1-201ENST00000362604 124 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.73-201ENST00000362910 113 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.486-201ENST00000384398 107 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 SNORD11-201ENST00000459124 84 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 RNU7-170P-201ENST00000459303 61 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 RNA5SP57-201ENST00000459463 123 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 RPS26P55-201ENST00000471178 356 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 RNU6-830P-201ENST00000516353 107 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 SNORA74D-201ENST00000516404 141 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 RNU6-1282P-201ENST00000516735 96 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 RNA5SP490-201ENST00000517141 136 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 AC021739.1-201ENST00000559631 174 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 MIR2682-201ENST00000580305 110 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD1Q8NHV4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.198-201ENST00000364013 98 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.290-201ENST00000364879 114 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 RNU6-1276P-201ENST00000365372 104 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 AL139095.1-201ENST00000404326 391 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 AL117342.1-201ENST00000404861 406 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 AC012308.1-201ENST00000451232 178 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 MRPS36P2-201ENST00000512569 299 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 RNU6-113P-201ENST00000516653 101 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 MIR3129-201ENST00000581095 76 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 AP001486.2-201ENST00000561652 5113 ntBASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.82□□□□□ -1.8
NEDD1Q8NHV4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 RNU6-497P-201ENST00000365316 104 ntBASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 AC007064.1-201ENST00000412238 351 ntBASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 snoU13.4-201ENST00000458916 104 ntBASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 RPL23AP91-201ENST00000569211 455 ntBASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 AC002064.3-201ENST00000623448 346 ntBASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NEDD1Q8NHV4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 RNA5SP374-201ENST00000362939 125 ntBASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 VDAC1P3-201ENST00000434069 851 ntBASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 AC083906.5-201ENST00000503722 328 ntBASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 IGKV3-31-201ENST00000523109 329 ntBASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 Pinc.1-201ENST00000616452 154 ntBASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.8□□□□□ -1.8
NEDD1Q8NHV4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 RNY4P6-201ENST00000363667 96 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.344-201ENST00000365381 112 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 MIR562-201ENST00000384894 95 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 MIR483-201ENST00000385070 76 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 RNA5SP511-201ENST00000410487 115 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 AC145146.1-201ENST00000496370 254 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 AC011406.1-201ENST00000512440 370 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 SCARNA15-202ENST00000516881 127 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 MIR3690-201ENST00000580266 75 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 AC107294.3-201ENST00000609211 526 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 RNVU1-4-201ENST00000612985 164 ntBASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NEDD1Q8NHV4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD1Q8NHV4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NEDD1Q8NHV4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD1Q8NHV4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.796-201ENST00000364268 102 ntBASIC3.78□□□□□ -1.8
NEDD1Q8NHV4 RNY1P1-201ENST00000364372 112 ntBASIC3.78□□□□□ -1.8
NEDD1Q8NHV4 Y_RNA.799-201ENST00000364992 102 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms