Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
BEST4Q8NFU0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.44□□□□□ -2.18
BEST4Q8NFU0 ICE2P2-201ENST00000483823 2787 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
BEST4Q8NFU0 RNU6-1266P-201ENST00000362794 105 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 RNU6-1264P-201ENST00000383891 107 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 RNU6-20P-201ENST00000384106 107 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 RNA5SP212-201ENST00000391223 107 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 RNA5SP475-201ENST00000410568 110 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 AC009310.1-201ENST00000414414 451 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 AL121890.1-201ENST00000435457 205 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 AC099799.1-201ENST00000439809 192 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 RPEP5-201ENST00000441137 268 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 RPL26P26-201ENST00000480251 434 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 GNAI2P1-201ENST00000541815 315 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.43□□□□□ -2.18
BEST4Q8NFU0 MIR4438-201ENST00000585271 93 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 AC092881.1-201ENST00000638218 2733 ntBASIC1.43□□□□□ -2.18
BEST4Q8NFU0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
BEST4Q8NFU0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
BEST4Q8NFU0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.43□□□□□ -2.18
BEST4Q8NFU0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AL356292.1-201ENST00000283110 373 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 RNU6-203P-201ENST00000384038 104 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 Y_RNA.445-201ENST00000384168 102 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 Y_RNA.535-201ENST00000384612 99 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 MIR9-3-201ENST00000385084 90 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC022028.1-201ENST00000412054 408 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC008134.1-201ENST00000420943 193 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 MIR4713-201ENST00000582691 75 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC073413.2-201ENST00000604332 360 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC022217.4-201ENST00000604389 163 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AL021879.1-201ENST00000611756 288 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC240442.1-201ENST00000616055 283 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC090971.5-201ENST00000621102 293 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC091925.1-201ENST00000623204 462 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 U6.115-201ENST00000636045 103 ntBASIC1.42□□□□□ -2.18
BEST4Q8NFU0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.42□□□□□ -2.18
BEST4Q8NFU0 AC100821.1-201ENST00000523153 2479 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 RNU6-626P-201ENST00000363354 107 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.41□□□□□ -2.18
BEST4Q8NFU0 MIR520A-201ENST00000384862 85 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 SNORA3.2-201ENST00000408221 125 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 EBAG9P1-201ENST00000418955 543 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 PMCHL1-202ENST00000423102 261 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AC018865.2-201ENST00000423631 129 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 CST2P1-201ENST00000425770 87 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 TOMM22P2-201ENST00000430735 237 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AL137792.2-201ENST00000443484 235 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 RNU6-397P-201ENST00000516226 104 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 RNU6-1012P-201ENST00000516606 109 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 RNU1-142P-201ENST00000516682 145 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AC091544.4-201ENST00000555268 342 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AC110588.1-201ENST00000559699 137 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.41□□□□□ -2.18
BEST4Q8NFU0 MIR4672-201ENST00000583126 81 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AL929325.1-201ENST00000603096 117 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AC090574.1-201ENST00000623186 233 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AC064859.1-201ENST00000624741 174 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.41□□□□□ -2.18
BEST4Q8NFU0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.41□□□□□ -2.18
BEST4Q8NFU0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
BEST4Q8NFU0 Y_RNA.39-201ENST00000362620 98 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RNU5F-3P-201ENST00000363767 117 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 SNORA72.2-201ENST00000365028 127 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RNY3P4-201ENST00000384428 101 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
BEST4Q8NFU0 SNORD78.2-201ENST00000391076 69 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RPL21P1-201ENST00000399532 476 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RPS27P1-201ENST00000450552 247 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RNU7-34P-201ENST00000459394 64 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AC010655.3-201ENST00000478818 450 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RNU6-1170P-201ENST00000515974 106 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RNA5SP182-201ENST00000516064 82 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 SNORA31.10-201ENST00000516482 106 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 RN7SKP295-201ENST00000517264 153 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.4□□□□□ -2.19
BEST4Q8NFU0 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 VN1R91P-201ENST00000594377 169 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AC010900.2-201ENST00000604508 210 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AL353149.1-201ENST00000610667 244 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AL590808.1-201ENST00000618696 141 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 U6.73-201ENST00000619194 103 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AL160413.1-201ENST00000622780 310 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 AL606534.2-204ENST00000635008 178 ntBASIC1.4□□□□□ -2.19
BEST4Q8NFU0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
BEST4Q8NFU0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
BEST4Q8NFU0 Y_RNA.148-201ENST00000363557 117 ntBASIC1.39□□□□□ -2.19
BEST4Q8NFU0 Y_RNA.252-201ENST00000364556 101 ntBASIC1.39□□□□□ -2.19
BEST4Q8NFU0 SNORD42.2-201ENST00000365570 69 ntBASIC1.39□□□□□ -2.19
BEST4Q8NFU0 Y_RNA.510-201ENST00000384511 114 ntBASIC1.39□□□□□ -2.19
BEST4Q8NFU0 RNU4-30P-201ENST00000410245 143 ntBASIC1.39□□□□□ -2.19
BEST4Q8NFU0 RN7SKP192-201ENST00000411291 327 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms