Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 SNORD50.1-201ENST00000362987 71 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 MIR521-1-201ENST00000384902 87 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 SNORA26.8-201ENST00000391306 124 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 SNORD99-201ENST00000408612 74 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AL663109.1-201ENST00000411498 844 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AL358176.2-201ENST00000425769 204 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AL359672.1-201ENST00000442302 409 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 MRPS10P1-201ENST00000448483 130 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 RNU7-12P-201ENST00000516030 62 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 SNORA25.14-201ENST00000516481 132 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 RNU6-1038P-201ENST00000516516 104 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AC022868.1-201ENST00000517767 391 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AP003716.2-201ENST00000528260 108 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 AL121757.2-201ENST00000611223 313 ntBASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.36□□□□□ -2.35
CCDC112Q8NEF3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 Y_RNA.415-201ENST00000384012 112 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 MIR526A1-201ENST00000384897 85 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 RNA5SP127-201ENST00000411051 133 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AL365203.2-201ENST00000423444 196 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 U7.7-201ENST00000459276 60 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 RNU7-28P-201ENST00000516759 62 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 MTCO2P4-201ENST00000517968 247 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AC023157.2-201ENST00000540596 141 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AC091178.2-201ENST00000584401 117 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AC004223.2-201ENST00000590309 544 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AC092747.3-201ENST00000603769 301 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AL357078.3-201ENST00000607528 618 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AL158209.2-201ENST00000619266 216 ntBASIC0.35□□□□□ -2.35
CCDC112Q8NEF3 AC092423.1-201ENST00000430165 186 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AL162725.1-201ENST00000435405 301 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 Z82188.1-201ENST00000436709 154 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 MTCO2P16-201ENST00000436962 677 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC079354.2-201ENST00000453523 154 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC010469.2-201ENST00000496412 480 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 MTCO1P29-201ENST00000496868 288 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC027288.2-201ENST00000553028 243 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC100830.2-201ENST00000581636 240 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC025627.3-201ENST00000582078 182 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC131055.1-201ENST00000584626 316 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AL050303.3-201ENST00000613704 284 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC244015.1-201ENST00000622301 99 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 AC006435.5-201ENST00000624486 112 ntBASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.34□□□□□ -2.36
CCDC112Q8NEF3 RNA5SP264-201ENST00000363115 107 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 RNU6-873P-201ENST00000363833 107 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 Y_RNA.378-201ENST00000365652 113 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 RNU6-38P-201ENST00000384085 107 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 RNU5A-6P-201ENST00000384136 116 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 RNU6-1103P-201ENST00000384150 107 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 MIR32-201ENST00000384965 70 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 MTCO2P12-201ENST00000427426 682 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 RPL23AP50-201ENST00000434149 455 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 MTND4P18-201ENST00000447010 465 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 AP000870.1-201ENST00000472927 406 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 AC097462.1-201ENST00000514125 324 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 SNORD111.1-201ENST00000516421 86 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 AL133215.3-201ENST00000609801 448 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 AC109347.2-201ENST00000610220 349 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 AC093913.1-201ENST00000614178 329 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 AL109933.3-201ENST00000619095 188 ntBASIC0.33□□□□□ -2.36
CCDC112Q8NEF3 SNORA1B-201ENST00000362535 133 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 Y_RNA.167-201ENST00000363735 109 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 SNORD115-32-201ENST00000364079 82 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 Y_RNA.381-201ENST00000365666 102 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 SNORD89-201ENST00000390981 114 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AL353193.1-201ENST00000421444 268 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 MTCO2P19-201ENST00000427513 598 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 MRPS10P2-201ENST00000431226 381 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AL445567.1-201ENST00000439121 144 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AC091021.1-201ENST00000468051 388 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AC091179.3-201ENST00000474761 144 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AC107401.1-201ENST00000503426 685 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AC010598.1-201ENST00000510378 103 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 RNU6-341P-201ENST00000516973 96 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 MTND4LP26-201ENST00000518144 282 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AC109810.1-201ENST00000534066 224 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 AC023827.1-201ENST00000569247 97 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 Z94722.1-201ENST00000604328 474 ntBASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
CCDC112Q8NEF3 RNU6-727P-201ENST00000363592 107 ntBASIC0.31□□□□□ -2.36
CCDC112Q8NEF3 RNU6-214P-201ENST00000384130 107 ntBASIC0.31□□□□□ -2.36
CCDC112Q8NEF3 RNU6-163P-201ENST00000384396 106 ntBASIC0.31□□□□□ -2.36
CCDC112Q8NEF3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.31□□□□□ -2.36
CCDC112Q8NEF3 AL590002.1-201ENST00000406554 418 ntBASIC0.31□□□□□ -2.36
CCDC112Q8NEF3 MTCO3P19-201ENST00000415864 321 ntBASIC0.31□□□□□ -2.36
CCDC112Q8NEF3 AC244098.3-201ENST00000424803 96 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms