Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC073346.2-201ENST00000624724 2058 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-34-201ENST00000362441 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-12-201ENST00000362583 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-29-201ENST00000362834 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-9-201ENST00000362912 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-21-201ENST00000362963 81 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-14-201ENST00000363090 81 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 RNU1-23P-201ENST00000363361 144 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-41-201ENST00000363608 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-11-201ENST00000363616 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-5-201ENST00000363633 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-39-201ENST00000363694 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-4-201ENST00000363810 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-6-201ENST00000363942 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-42-201ENST00000364273 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORA1.1-201ENST00000364671 133 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-15-201ENST00000364809 81 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORA71.2-201ENST00000364941 134 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-26-201ENST00000365067 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-10-201ENST00000365073 81 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-43-201ENST00000365503 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORD115-36-201ENST00000365629 82 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 SNORA70F-201ENST00000384142 135 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 MIR218-1-201ENST00000384999 110 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 RNU2-48P-201ENST00000410694 191 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 AL163195.1-201ENST00000496941 348 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 RN7SL636P-201ENST00000497504 294 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 RN7SKP18-201ENST00000516005 275 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 MIR2116-201ENST00000517221 80 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 AC007224.1-201ENST00000564410 144 ntBASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
EFCAB3Q8N7B9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 RNA5SP360-201ENST00000516555 118 ntBASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 AC091178.1-203ENST00000584586 279 ntBASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 AL356280.1-201ENST00000603614 379 ntBASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 MIR92B-201ENST00000607575 96 ntBASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 ICE2P2-201ENST00000483823 2787 ntBASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
EFCAB3Q8N7B9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.4□□□□□ -1.7
EFCAB3Q8N7B9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
EFCAB3Q8N7B9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.4□□□□□ -1.7
EFCAB3Q8N7B9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
EFCAB3Q8N7B9 MFSD8-242ENST00000641690 4199 ntBASIC4.4□□□□□ -1.7
EFCAB3Q8N7B9 RNU6-633P-201ENST00000362612 103 ntBASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 AP000567.1-201ENST00000406413 156 ntBASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 HLA-N-201ENST00000437516 135 ntBASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 ATP5J2P3-201ENST00000451550 258 ntBASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 RPS26P28-201ENST00000470806 348 ntBASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 MIR3939-201ENST00000582614 106 ntBASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
EFCAB3Q8N7B9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 MFSD8-233ENST00000641482 4860 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 Y_RNA.171-201ENST00000363760 102 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RNU6-1319P-201ENST00000390855 104 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RNU6-747P-201ENST00000390928 104 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RNU6-241P-201ENST00000391148 104 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RNU6-177P-201ENST00000411257 104 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 SRIP3-201ENST00000413200 219 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 CST2P1-201ENST00000425770 87 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RN7SL271P-201ENST00000487601 295 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RN7SL504P-201ENST00000494496 287 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RNA5SP309-201ENST00000516670 106 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 RPPH1-2P-201ENST00000516688 293 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 MIR3152-201ENST00000579801 74 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 MIR3199-1-201ENST00000582434 88 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 ELOCP29-201ENST00000588193 334 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 AP005019.3-201ENST00000620418 560 ntBASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
EFCAB3Q8N7B9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 AL353746.1-201ENST00000566293 6881 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 Y_RNA.191-201ENST00000363972 113 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 Y_RNA.316-201ENST00000365118 111 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 RNU6-1328P-201ENST00000410938 106 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 Z92545.1-201ENST00000411782 234 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 TRIAP1P1-201ENST00000427062 225 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 AL135938.1-201ENST00000443141 297 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 PHBP16-201ENST00000446318 950 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 CYCSP35-201ENST00000451978 304 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 AC108729.3-201ENST00000513484 108 ntBASIC4.38□□□□□ -1.71
EFCAB3Q8N7B9 AC090821.2-201ENST00000523552 176 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms