Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 U8.7-201ENST00000364940 136 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 RNU6-886P-201ENST00000384319 105 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 SNORD15B-201ENST00000384714 146 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 MIR562-201ENST00000384894 95 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.54□□□□□ -2
LYSMD2Q8IV50 MIR1262-201ENST00000408276 93 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 COX6CP10-201ENST00000416832 224 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.54□□□□□ -2
LYSMD2Q8IV50 AC009220.1-201ENST00000451614 275 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 AC117454.1-201ENST00000491120 168 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 RN7SKP164-201ENST00000516138 266 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 RNU6-1041P-201ENST00000516254 102 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 RNU7-99P-201ENST00000516271 62 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 AC100767.1-201ENST00000528178 123 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 LARP7P3-201ENST00000579888 337 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.54□□□□□ -2
LYSMD2Q8IV50 U6.106-201ENST00000636360 105 ntBASIC2.54□□□□□ -2
LYSMD2Q8IV50 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.53□□□□□ -2
LYSMD2Q8IV50 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 RNU6-23P-201ENST00000363283 107 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 RNU1-96P-201ENST00000364163 162 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 RNU6-47P-201ENST00000383866 107 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 RNU6-417P-201ENST00000384712 107 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 MIR626-201ENST00000385032 94 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 SNORD67-201ENST00000390833 111 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 MIR937-201ENST00000401271 86 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 SNORA11.4-201ENST00000408823 129 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 SNORA36B-201ENST00000410438 131 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD2Q8IV50 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD2Q8IV50 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.53□□□□□ -2
LYSMD2Q8IV50 RNY3P16-201ENST00000516338 101 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 RNU1-142P-201ENST00000516682 145 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 AC127455.1-201ENST00000565496 145 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.53□□□□□ -2
LYSMD2Q8IV50 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 Y_RNA.172-201ENST00000363765 102 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 RNA5SP493-201ENST00000364115 91 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 RNU6-117P-201ENST00000365415 107 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 SNORA7.4-201ENST00000384249 137 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 SNORA72-201ENST00000384339 132 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 SNORD116-13-201ENST00000384408 92 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 Y_RNA.571-201ENST00000384753 98 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 MIR141-201ENST00000384975 95 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 MIR520G-201ENST00000385064 90 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 RNA5SP511-201ENST00000410487 115 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 CST2P1-201ENST00000425770 87 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 RPL23AP54-201ENST00000495129 419 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 AC024995.1-201ENST00000523014 93 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 AC021269.2-201ENST00000532318 330 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 AC091953.5-201ENST00000622919 233 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 MIR622-201ENST00000638396 96 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
LYSMD2Q8IV50 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 Y_RNA.150-201ENST00000363562 102 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 SNORD114-6-201ENST00000364393 72 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 Y_RNA.238-201ENST00000364441 102 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 RNU6-1062P-201ENST00000383908 107 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 RNA5SP323-201ENST00000391094 133 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 AL512604.1-201ENST00000404812 257 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 RNA5SP181-201ENST00000410246 98 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 RNU6-1186P-201ENST00000410429 97 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 EBAG9P1-201ENST00000418955 543 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 RNU6-63P-201ENST00000516690 95 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 AC015720.1-201ENST00000565251 277 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 MIR4308-201ENST00000580634 81 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 MIR2681-201ENST00000581814 105 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 MIR3605-201ENST00000583214 100 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 MIR378J-201ENST00000611988 109 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 MIR338-201ENST00000636369 67 ntBASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
LYSMD2Q8IV50 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 Y_RNA.464-201ENST00000384282 110 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 RNU1-148P-201ENST00000384472 162 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 MIR490-201ENST00000384865 128 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 RNU7-94P-201ENST00000459576 63 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 RNU6-861P-201ENST00000516745 106 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 UBL5P2-201ENST00000583788 219 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 AL031274.2-201ENST00000599419 203 ntBASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.5□□□□□ -2.01
LYSMD2Q8IV50 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
LYSMD2Q8IV50 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LYSMD2Q8IV50 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LYSMD2Q8IV50 RNU1-58P-201ENST00000362413 163 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms