Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC149Q6ZUS6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 Y_RNA.143-201ENST00000363520 106 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 SNORA6-201ENST00000384033 151 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 RNU2-54P-201ENST00000410299 190 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 AL390729.2-201ENST00000416137 156 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 MTND2P29-201ENST00000438595 412 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 SNORD65B-201ENST00000459126 73 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 MIR5694-201ENST00000581190 76 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 AL360085.1-201ENST00000604713 532 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 AC006435.5-201ENST00000624486 112 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 U6.115-201ENST00000636045 103 ntBASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC149Q6ZUS6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 snoU2-30.2-201ENST00000362805 70 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 Y_RNA.101-201ENST00000363154 102 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 AL117342.1-201ENST00000404861 406 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 IPO7P1-201ENST00000442031 636 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 SUMO1P2-201ENST00000452524 304 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 RPL23AP42-201ENST00000471152 471 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 AC010655.3-201ENST00000478818 450 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 SNORA31.11-201ENST00000516528 139 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 AC136932.1-201ENST00000574771 208 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 AC022441.3-201ENST00000605737 136 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 AC005828.6-201ENST00000606610 232 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 AL353997.5-201ENST00000618886 171 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 MIR338-201ENST00000636369 67 ntBASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC149Q6ZUS6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 Y_RNA.210-201ENST00000364161 110 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 RNU6-937P-201ENST00000384325 106 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 MIR1253-201ENST00000408273 105 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 HMGN2P34-201ENST00000437647 269 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 AC010598.1-201ENST00000510378 103 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 RNA5SP458-201ENST00000516188 119 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 RNU6-1046P-201ENST00000516538 107 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 AC007229.1-201ENST00000590455 412 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 AC006380.1-201ENST00000603598 186 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC149Q6ZUS6 AC092881.1-201ENST00000638218 2733 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 Y_RNA.162-201ENST00000363683 102 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 Y_RNA.214-201ENST00000364201 112 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 AL355497.1-201ENST00000406262 551 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 ELOCP20-201ENST00000422460 345 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 RPS15AP28-201ENST00000435088 386 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 MTND5P22-201ENST00000458380 195 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 MRPS35P2-201ENST00000508242 191 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 Y_RNA.676-201ENST00000516393 96 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 SNORA40.15-201ENST00000516884 107 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 AC008749.1-201ENST00000597650 306 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 AC008737.2-201ENST00000599446 118 ntBASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC149Q6ZUS6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 SNORD115-30-201ENST00000364117 82 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 Y_RNA.287-201ENST00000364853 94 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 Y_RNA.361-201ENST00000365515 120 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 SNORA20B-201ENST00000384220 132 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 SNORA48.1-201ENST00000390879 135 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 SNORD115-46-201ENST00000390982 71 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 RPL21P1-201ENST00000399532 476 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 AL355796.1-201ENST00000406706 323 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 RNU2-20P-201ENST00000410425 191 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 AC099677.2-201ENST00000436385 175 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 AC005042.3-201ENST00000453230 174 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 AC025465.3-201ENST00000510570 311 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 RNU6-1143P-201ENST00000516125 104 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 RNU6-155P-201ENST00000516347 100 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 MIR4300-201ENST00000581016 96 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 AC011373.1-201ENST00000607270 237 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 MIR376A1-201ENST00000616574 68 ntBASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC149Q6ZUS6 RNU6-862P-201ENST00000362804 105 ntBASIC2.38□□□□□ -2.03
CCDC149Q6ZUS6 RNU6-770P-201ENST00000363929 105 ntBASIC2.38□□□□□ -2.03
CCDC149Q6ZUS6 SNORA16B-201ENST00000364674 135 ntBASIC2.38□□□□□ -2.03
CCDC149Q6ZUS6 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms