Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 RPL23AP58-201ENST00000440453 469 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 AL137159.1-201ENST00000452808 512 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 U8.19-201ENST00000459095 133 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 SNORD65B-201ENST00000459126 73 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 RN7SL633P-201ENST00000488974 297 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 RPL36AP21-201ENST00000490372 323 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 MIR3945-201ENST00000581853 98 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 MIR6715A-201ENST00000615929 79 ntBASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RUFY4Q6ZNE9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 Y_RNA.7-201ENST00000362352 102 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 SNORA27.1-201ENST00000362604 124 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 SNORA9.2-201ENST00000365361 133 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 RNU6-493P-201ENST00000391321 108 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AL355796.1-201ENST00000406706 323 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 RNU6-57P-201ENST00000411348 103 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AC087499.2-201ENST00000432861 149 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AL121890.1-201ENST00000435457 205 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AL357134.1-201ENST00000445848 426 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AL392103.1-201ENST00000447000 198 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 RNY3P16-201ENST00000516338 101 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AC025647.1-201ENST00000517879 253 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 AC100767.1-201ENST00000528178 123 ntBASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.19□□□□□ -1.9
RUFY4Q6ZNE9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 MAPK10-266ENST00000641066 6555 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 RNU6-461P-201ENST00000364195 107 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 RNU6-144P-201ENST00000383951 107 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 RNU4-61P-201ENST00000411243 107 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 AL109933.2-201ENST00000452651 260 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 AC093259.1-201ENST00000509755 300 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 HMGB3P3-201ENST00000510526 400 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 RNU6-965P-201ENST00000516721 96 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 SUMO2P18-201ENST00000518873 252 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 AC022559.1-201ENST00000520905 205 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 AL355297.2-201ENST00000604792 129 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
RUFY4Q6ZNE9 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 Y_RNA.571-201ENST00000384753 98 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 RNU6-220P-201ENST00000390919 107 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 MIR887-201ENST00000401258 79 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 AC123900.1-201ENST00000420390 96 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 RPS26P55-201ENST00000471178 356 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 MRPS18CP4-201ENST00000535821 231 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 AC090115.4-201ENST00000609970 188 ntBASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.17□□□□□ -1.9
RUFY4Q6ZNE9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 RNU1-23P-201ENST00000363361 144 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 RNU6-1240P-201ENST00000365155 104 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 U8.9-201ENST00000365667 134 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 SNORD14D-201ENST00000384390 87 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 SNORA8.3-201ENST00000384679 139 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 RNU2-52P-201ENST00000410680 190 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 AC063976.3-201ENST00000426849 329 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 CR769767.1-201ENST00000436337 346 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 MTCO1P44-201ENST00000441935 243 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 AC016717.1-201ENST00000448918 286 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.16□□□□□ -1.9
RUFY4Q6ZNE9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.15□□□□□ -1.9
RUFY4Q6ZNE9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
RUFY4Q6ZNE9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RUFY4Q6ZNE9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.238-201ENST00000364441 102 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-312P-201ENST00000364629 107 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-418P-201ENST00000384035 107 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 Y_RNA.441-201ENST00000384123 112 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 MIR526A2-201ENST00000390198 65 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 RNU2-48P-201ENST00000410694 191 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 RNA5SP508-201ENST00000411327 119 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 AL451074.5-201ENST00000415894 435 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 RPS20P10-201ENST00000451209 253 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 RN7SKP164-201ENST00000516138 266 ntBASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RUFY4Q6ZNE9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 RNU6-103P-201ENST00000363686 107 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 RNU1-112P-201ENST00000364401 164 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 MIR626-201ENST00000385032 94 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 MIR181B1-201ENST00000385240 110 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 SNORA26.7-201ENST00000391288 122 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 MTCO2P33-201ENST00000402100 465 ntBASIC3.14□□□□□ -1.91
RUFY4Q6ZNE9 AL513477.1-202ENST00000417061 214 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms