Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC005828.6-201ENST00000606610 232 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 AL021879.1-201ENST00000611756 288 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 AL590240.4-201ENST00000616908 390 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.424-201ENST00000384063 103 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 MIR1261-201ENST00000408659 82 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-985P-201ENST00000410182 104 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 BX510359.4-201ENST00000423750 193 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 AC073910.1-201ENST00000445047 438 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 MRPS17P9-201ENST00000511924 393 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 RNU2-19P-201ENST00000517288 84 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 MIR4529-201ENST00000578110 78 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 MIR3684-201ENST00000579779 74 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 AL355297.3-201ENST00000604082 446 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 AC040896.1-201ENST00000613819 479 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 uc_338.20-201ENST00000621563 178 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 AC130454.1-201ENST00000622948 401 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 MIR3674-201ENST00000636576 68 ntBASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.22□□□□□ -2.05
SYNE3Q6ZMZ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-1310P-201ENST00000384153 107 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-1160P-201ENST00000384546 104 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AL117342.1-201ENST00000404861 406 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 SUMO2P12-201ENST00000405924 140 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 RNA5SP450-201ENST00000411206 102 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-57P-201ENST00000411348 103 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AC008134.1-201ENST00000420943 193 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AC060773.1-201ENST00000421698 310 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 U8.20-201ENST00000459445 131 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AC055731.1-201ENST00000474387 401 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 SUMO2P18-201ENST00000518873 252 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AC005786.1-201ENST00000588553 154 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AC124312.5-201ENST00000604451 268 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 AC007742.2-201ENST00000618226 398 ntBASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-23P-201ENST00000363283 107 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 Y_RNA.153-201ENST00000363615 91 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-454P-201ENST00000364292 107 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 SNORA63C-201ENST00000364578 129 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 SNORD63-201ENST00000384262 68 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AL590004.1-201ENST00000405321 300 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-101P-201ENST00000410323 104 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AL121890.1-201ENST00000435457 205 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AC005002.2-201ENST00000438228 269 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 YWHAEP4-201ENST00000505390 198 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-408P-201ENST00000515910 100 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 RNA5SP182-201ENST00000516064 82 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 RNU2-12P-201ENST00000517216 168 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AC055872.1-201ENST00000570978 278 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 Y_RNA.772-201ENST00000606692 102 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AC011476.5-201ENST00000615594 130 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 MIR6715A-201ENST00000615929 79 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 AP006437.1-201ENST00000641440 3685 ntBASIC2.2□□□□□ -2.06
SYNE3Q6ZMZ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-926P-201ENST00000384075 107 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 Y_RNA.471-201ENST00000384312 102 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-738P-201ENST00000384531 106 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 UBL5P3-201ENST00000475112 231 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 MIR3124-201ENST00000582636 67 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 AC006504.6-201ENST00000590142 199 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 RAC1P9-201ENST00000604990 392 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 AC006435.5-201ENST00000624486 112 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 AC099654.10-201ENST00000640395 161 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 AL159152.1-201ENST00000635019 2587 ntBASIC2.19□□□□□ -2.06
SYNE3Q6ZMZ3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 SNORD114-7-201ENST00000362520 77 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-450P-201ENST00000364654 107 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 Y_RNA.389-201ENST00000383924 113 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 RNA5SP489-201ENST00000410986 109 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 SUMO1P2-201ENST00000452524 304 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 snoU13.15-201ENST00000459407 104 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 RN7SL274P-201ENST00000492268 272 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 AC107393.1-201ENST00000512403 346 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 AC011406.1-201ENST00000512440 370 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 RNU6-764P-201ENST00000516396 105 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 MIR4287-201ENST00000579398 78 ntBASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SYNE3Q6ZMZ3 Y_RNA.183-201ENST00000363882 113 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms