Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 AC103810.8-201ENST00000607347 118 ntBASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 PISRT1.1-201ENST00000616930 107 ntBASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 AC008873.1-201ENST00000625051 138 ntBASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 ZNF299P-201ENST00000406845 1804 ntBASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
NHLRC1Q6VVB1 MTND5P16-201ENST00000460269 1703 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 RNU6-490P-201ENST00000362985 107 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 Y_RNA.106-201ENST00000363189 100 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 RNU6-505P-201ENST00000384427 107 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 Y_RNA.512-201ENST00000384518 102 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 MIR764-201ENST00000390811 85 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 RNU2-20P-201ENST00000410425 191 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 HMGN2P9-201ENST00000476875 229 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 AC010409.1-201ENST00000487382 476 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 RNU6-988P-201ENST00000519081 107 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 AL590705.4-201ENST00000532209 134 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 MIR5701-3-201ENST00000578890 82 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 AC113195.1-201ENST00000579952 141 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 MIR4503-201ENST00000582187 83 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 MIR5701-1-201ENST00000585138 82 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 AC092447.9-201ENST00000603395 144 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 MIR5701-2-201ENST00000615634 82 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 snoZ196.1-201ENST00000625269 89 ntBASIC1.66□□□□□ -2.14
NHLRC1Q6VVB1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
NHLRC1Q6VVB1 Y_RNA.26-201ENST00000362539 101 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-1266P-201ENST00000362794 105 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 RNA5SP99-201ENST00000364020 114 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 Y_RNA.422-201ENST00000384054 114 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 MIR1267-201ENST00000408723 78 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 RPL31P63-201ENST00000422565 375 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 snoU13.9-201ENST00000458927 103 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 AC010655.3-201ENST00000478818 450 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-764P-201ENST00000516396 105 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 Y_RNA.706-201ENST00000516933 99 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 RNU1-117P-201ENST00000517041 158 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 AC110588.1-201ENST00000559699 137 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 SUB1P3-201ENST00000564581 315 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 MIR5696-201ENST00000578474 85 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 AC087588.2-201ENST00000617667 426 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 MIR4272-201ENST00000635924 64 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 AC068205.3-201ENST00000636385 468 ntBASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
NHLRC1Q6VVB1 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 Y_RNA.193-201ENST00000363979 102 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 RNU4-42P-201ENST00000364738 142 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 RNU1-115P-201ENST00000365329 160 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-708P-201ENST00000384217 107 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 MIR9-3-201ENST00000385084 90 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 MIR549A-201ENST00000385268 96 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 U8.13-201ENST00000390842 128 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-823P-201ENST00000391042 103 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-57P-201ENST00000411348 103 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AC060773.1-201ENST00000421698 310 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 MTCYBP9-201ENST00000431021 303 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 SNORA25.10-201ENST00000515926 124 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AC024995.1-201ENST00000523014 93 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AP000942.4-201ENST00000604811 241 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AC100812.1-201ENST00000607622 580 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 MIR1244-1-201ENST00000612829 85 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AC133104.2-201ENST00000615272 193 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 MIR1244-3-201ENST00000635744 85 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 MIR1244-2-201ENST00000636449 85 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 MIR1244-4-202ENST00000636813 85 ntBASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NHLRC1Q6VVB1 AC005592.1-201ENST00000566527 1640 ntBASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 RNY1P16-201ENST00000363063 111 ntBASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 U3.8-201ENST00000363675 217 ntBASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 SNORD48-201ENST00000364953 64 ntBASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-17P-201ENST00000384245 107 ntBASIC1.63□□□□□ -2.15
NHLRC1Q6VVB1 RNU6-463P-201ENST00000384340 107 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms