Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL137100.2-201ENST00000555786 315 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 7SK.7-201ENST00000603504 247 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 SNORD3E-202ENST00000627253 216 ntBASIC0.87□□□□□ -2.27
H3F3CQ6NXT2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 RNU6-222P-201ENST00000362438 107 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 U3.8-201ENST00000363675 217 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 SNORD115-32-201ENST00000364079 82 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.436-201ENST00000384097 102 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.473-201ENST00000384333 102 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.554-201ENST00000384672 102 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 RNU6-159P-201ENST00000391080 106 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 MRPL42P3-201ENST00000401492 326 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 ZNF885P-201ENST00000420174 1098 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 STAG3L5P-204ENST00000443759 179 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 RPS29P1-201ENST00000465274 159 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 AC092991.1-201ENST00000477176 376 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 RPS27P22-201ENST00000478056 241 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 RNU6-947P-201ENST00000516264 106 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 RNU7-128P-201ENST00000517247 62 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 MIR4438-201ENST00000585271 93 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 MIR6128-201ENST00000615528 109 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 U6.73-201ENST00000619194 103 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 AC048344.4-201ENST00000619744 527 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 AL391516.1-201ENST00000554380 2449 ntBASIC0.86□□□□□ -2.27
H3F3CQ6NXT2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 SNORD115-8-201ENST00000363856 82 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.269-201ENST00000364685 89 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 SNORD115-38-201ENST00000365037 82 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 RNU6-17P-201ENST00000384245 107 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 RNU6-18P-201ENST00000384527 107 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 MTND4P18-201ENST00000447010 465 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 SNORD65B-201ENST00000459126 73 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 AC010469.2-201ENST00000496412 480 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 AC093534.1-201ENST00000504977 132 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 RNU7-175P-201ENST00000515915 61 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 SNORA31.4-201ENST00000516049 129 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 RNU6-1088P-201ENST00000516850 104 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 RNU6-165P-201ENST00000517170 99 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 AC024909.2-201ENST00000553035 286 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 AC211469.2-201ENST00000605461 205 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 MIR6788-201ENST00000618842 66 ntBASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.85□□□□□ -2.27
H3F3CQ6NXT2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.122-201ENST00000363331 96 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.135-201ENST00000363439 95 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 Y_RNA.184-201ENST00000363884 108 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 RNU6-280P-201ENST00000364145 104 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 MIR10B-201ENST00000385011 110 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 SNORA12.1-201ENST00000390873 148 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 USP9YP30-201ENST00000430729 455 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 SNORA31.2-201ENST00000516019 134 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 RNU7-99P-201ENST00000516271 62 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 RNA5SP220-201ENST00000516298 104 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 AC109635.3-201ENST00000529536 185 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 APOOP3-201ENST00000536787 586 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 AL390123.1-201ENST00000603216 237 ntBASIC0.84□□□□□ -2.27
H3F3CQ6NXT2 RNU4-12P-201ENST00000365233 139 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.402-201ENST00000383972 102 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 RNU6-42P-201ENST00000384165 107 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 RNU6-831P-201ENST00000384548 107 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 AL355796.1-201ENST00000406706 323 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 AL034345.1-201ENST00000407768 123 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 RNU6-1148P-201ENST00000410992 104 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 POLR2J4-204ENST00000418424 324 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 MTND3P23-201ENST00000431980 347 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 snoU13.18-201ENST00000459483 104 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 RNU6-1314P-201ENST00000517139 104 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 AC134698.4-201ENST00000523451 826 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 AL590705.4-201ENST00000532209 134 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 AC022432.1-201ENST00000595739 310 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 AC010999.1-201ENST00000611856 324 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 RMST_2.1-201ENST00000617263 136 ntBASIC0.83□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.106-201ENST00000363189 100 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 RNU6-137P-201ENST00000363680 108 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 Y_RNA.267-201ENST00000364679 109 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 RNU6-505P-201ENST00000384427 107 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 RNU11-5P-201ENST00000391216 129 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 AC243428.1-201ENST00000421099 264 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 AL589823.1-201ENST00000429577 183 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 AC093850.1-201ENST00000454121 251 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 RNU7-87P-201ENST00000459343 62 ntBASIC0.82□□□□□ -2.28
H3F3CQ6NXT2 RNU1-54P-201ENST00000517181 120 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms