Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 SDAD1P3-201ENST00000427380 333 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 MTND1P14-201ENST00000427400 950 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 AC093852.1-201ENST00000503587 266 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 YWHAEP4-201ENST00000505390 198 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 RNU6-988P-201ENST00000519081 107 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 AC040926.1-201ENST00000530195 238 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 AC055872.1-201ENST00000570978 278 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 AC010205.1-201ENST00000616668 449 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 U1.36-201ENST00000620684 176 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 AC022140.2-201ENST00000623500 188 ntBASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
NHLRC3Q5JS37 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 Y_RNA.458-201ENST00000384240 102 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 MIR9-3-201ENST00000385084 90 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 AL512604.1-201ENST00000404812 257 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 AL158823.1-201ENST00000418441 478 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 SNORD65B-201ENST00000459126 73 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 RPS29P30-201ENST00000600975 111 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 AC005034.5-201ENST00000604219 466 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 AC008555.8-201ENST00000623602 2168 ntBASIC1.49□□□□□ -2.17
NHLRC3Q5JS37 SNORA33-201ENST00000363664 130 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 RNU6-694P-201ENST00000364071 147 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 RNU1-96P-201ENST00000364163 162 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 SNORD14.1-201ENST00000365609 90 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 SNORA8-201ENST00000384574 139 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 RNU6-417P-201ENST00000384712 107 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 MRPL42P3-201ENST00000401492 326 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 RNA5SP475-201ENST00000410568 110 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 CST2P1-201ENST00000425770 87 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AC005534.2-201ENST00000431047 433 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 UBE2DNL-203ENST00000474922 222 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 RPS29P11-201ENST00000496507 171 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 RNU6-1146P-201ENST00000516282 102 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AC110588.1-201ENST00000559699 137 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 SUB1P4-201ENST00000566062 339 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 MIR5094-201ENST00000578766 85 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AL356055.1-201ENST00000602528 446 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AC104695.3-201ENST00000604052 296 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AL121655.1-201ENST00000605811 308 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 AC004467.1-201ENST00000615678 330 ntBASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
NHLRC3Q5JS37 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 RNU6-1266P-201ENST00000362794 105 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 RNU6-626P-201ENST00000363354 107 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 RNU6-20P-201ENST00000384106 107 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 RNU6-1310P-201ENST00000384153 107 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 Y_RNA.526-201ENST00000384572 110 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AL355796.1-201ENST00000406706 323 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 MIR1253-201ENST00000408273 105 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 RNA5SP100-201ENST00000410903 110 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 RNA5SP59-201ENST00000410922 110 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AC245047.4-201ENST00000433189 144 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AC022432.1-201ENST00000595739 310 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AL390123.1-201ENST00000603216 237 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AC005828.6-201ENST00000606610 232 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 AL773524.1-201ENST00000614065 229 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.47□□□□□ -2.17
NHLRC3Q5JS37 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 Y_RNA.101-201ENST00000363154 102 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 Y_RNA.111-201ENST00000363248 100 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 Y_RNA.202-201ENST00000364083 110 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 RNU4-50P-201ENST00000364361 141 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 Y_RNA.424-201ENST00000384063 103 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 SNORA20B-201ENST00000384220 132 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 RNU6-823P-201ENST00000391042 103 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 RNA5SP467-201ENST00000391274 118 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 RNU6-130P-201ENST00000411112 103 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 RPEP5-201ENST00000441137 268 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 AC010598.1-201ENST00000510378 103 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 RNU2-12P-201ENST00000517216 168 ntBASIC1.46□□□□□ -2.18
NHLRC3Q5JS37 AC022616.4-201ENST00000522985 181 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms