Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC010615.1-201ENST00000594254 1764 ntBASIC2.15□□□□□ -2.06
CCDC38Q502W7 Y_RNA.31-201ENST00000362574 102 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 MIR520A-201ENST00000384862 85 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 RNU6-308P-201ENST00000390957 107 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 MTCO2P12-201ENST00000427426 682 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 AC010205.1-201ENST00000616668 449 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 MIR6873-201ENST00000622788 63 ntBASIC2.15□□□□□ -2.07
CCDC38Q502W7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC38Q502W7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC38Q502W7 AC005592.1-201ENST00000566527 1640 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 Y_RNA.28-201ENST00000362554 111 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 RNU6-454P-201ENST00000364292 107 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 RNA5SP323-201ENST00000391094 133 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 RNA5SP467-201ENST00000391274 118 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 SUMO2P12-201ENST00000405924 140 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 RN7SKP192-201ENST00000411291 327 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 SUMO1P2-201ENST00000452524 304 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC38Q502W7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC38Q502W7 AL096840.1-201ENST00000603287 93 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 AL121655.1-201ENST00000605811 308 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 AL359075.3-201ENST00000613288 217 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 AC011476.5-201ENST00000615594 130 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 AC004467.1-201ENST00000615678 330 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 U6.73-201ENST00000619194 103 ntBASIC2.14□□□□□ -2.07
CCDC38Q502W7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
CCDC38Q502W7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC38Q502W7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC38Q502W7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC38Q502W7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
CCDC38Q502W7 Y_RNA.138-201ENST00000363462 102 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 SNORA33-201ENST00000363664 130 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 SNORA20B-201ENST00000384220 132 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 RNU6-296P-201ENST00000384608 107 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 MIR548P-201ENST00000408336 84 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 EBAG9P1-201ENST00000418955 543 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 AL121890.1-201ENST00000435457 205 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC38Q502W7 RNU1-142P-201ENST00000516682 145 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 RNU6-988P-201ENST00000519081 107 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC38Q502W7 AC005176.2-201ENST00000596933 147 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 AC091932.3-201ENST00000624223 323 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 U6.115-201ENST00000636045 103 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 AC091812.1-201ENST00000432235 1948 ntBASIC2.13□□□□□ -2.07
CCDC38Q502W7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC38Q502W7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CCDC38Q502W7 RNU6-626P-201ENST00000363354 107 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 SNORA63D-201ENST00000364359 132 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 SNORD14.1-201ENST00000365609 90 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 RNU6-20P-201ENST00000384106 107 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 AL023284.1-201ENST00000403956 276 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 AL355796.1-201ENST00000406706 323 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC38Q502W7 SNORA31.17-201ENST00000516953 127 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC38Q502W7 AL390123.1-201ENST00000603216 237 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 Y_RNA.772-201ENST00000606692 102 ntBASIC2.12□□□□□ -2.07
CCDC38Q502W7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CCDC38Q502W7 Y_RNA.148-201ENST00000363557 117 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 RNU6-271P-201ENST00000363858 105 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 RNU4-50P-201ENST00000364361 141 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 Y_RNA.424-201ENST00000384063 103 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 Y_RNA.458-201ENST00000384240 102 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCDC38Q502W7 MIR676-201ENST00000390702 67 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC38Q502W7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC38Q502W7 MRPS10P1-201ENST00000448483 130 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 RPS27P22-201ENST00000478056 241 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 Y_RNA.701-201ENST00000516812 110 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 AC027419.1-201ENST00000522976 328 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 AC040926.1-201ENST00000530195 238 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 MIR4438-201ENST00000585271 93 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 AC005828.6-201ENST00000606610 232 ntBASIC2.11□□□□□ -2.07
CCDC38Q502W7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CCDC38Q502W7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC38Q502W7 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 RNU2-7P-201ENST00000410794 178 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 AL354751.2-201ENST00000415471 210 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 DPH3P2-201ENST00000422618 250 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC38Q502W7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC38Q502W7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC38Q502W7 RPS29P21-201ENST00000496272 170 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 Y_RNA.713-201ENST00000517013 96 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 RNU2-12P-201ENST00000517216 168 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 AC055872.1-201ENST00000570978 278 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 AC006380.1-201ENST00000603598 186 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC38Q502W7 U6.108-201ENST00000637764 58 ntBASIC2.1□□□□□ -2.07
CCDC38Q502W7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms