Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 SNORA73.2-201ENST00000364946 201 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 RNU6-1144P-201ENST00000384247 104 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 MIR184-201ENST00000384962 84 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 SNORA12.1-201ENST00000390873 148 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 RNA5SP323-201ENST00000391094 133 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 GOT2P5-201ENST00000433995 546 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 AC018868.1-201ENST00000491307 315 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 CYCTP-201ENST00000504253 315 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 AC104619.4-201ENST00000510773 249 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 MIR6075-201ENST00000620782 95 ntBASIC3.84□□□□□ -1.79
TMEM259Q4ZIN3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TMEM259Q4ZIN3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 SNORA71.3-201ENST00000362582 128 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 RNA5SP125-201ENST00000364843 120 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 SNORA25B-201ENST00000365507 128 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 AL603914.1-201ENST00000401964 204 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 MIR1289-1-201ENST00000408836 144 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 RNA5SP127-201ENST00000411051 133 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 AC003685.2-201ENST00000422795 395 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 NDUFA4P2-201ENST00000489989 244 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 AC091178.2-201ENST00000584401 117 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 SNORA51-201ENST00000606420 132 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 MIR6079-201ENST00000635807 62 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 MIR338-201ENST00000636369 67 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 MIR3914-2-201ENST00000637339 95 ntBASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.83□□□□□ -1.8
TMEM259Q4ZIN3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 AC018630.2-201ENST00000534866 2403 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 Y_RNA.253-201ENST00000364562 112 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 SNORA22-201ENST00000383907 134 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 MIR200C-201ENST00000384980 68 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 MIR449B-201ENST00000384995 97 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 SRIP3-201ENST00000413200 219 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 AC002075.2-201ENST00000425207 252 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 MRPS17P9-201ENST00000511924 393 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 AC096725.1-201ENST00000514266 313 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 RNA5SP164-201ENST00000516533 110 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 AC026403.1-201ENST00000518938 295 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 MIR3613-201ENST00000579844 87 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 MIR5187-201ENST00000583479 76 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 U6.95-201ENST00000636931 70 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 MIR7153-201ENST00000637758 57 ntBASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TMEM259Q4ZIN3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 RNU6-461P-201ENST00000364195 107 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 RNU6-309P-201ENST00000364573 106 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 SNORA5A-201ENST00000384111 134 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 ARF4P2-201ENST00000430209 526 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 AL353689.1-201ENST00000438895 199 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 AC091153.1-201ENST00000466297 402 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 RNU6-341P-201ENST00000516973 96 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 RNU7-128P-201ENST00000517247 62 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 AC022217.4-201ENST00000604389 163 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
TMEM259Q4ZIN3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 MIR624-201ENST00000385217 97 ntBASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 AC091826.1-201ENST00000514065 313 ntBASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 Y_RNA.714-201ENST00000517065 90 ntBASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 AC022695.1-201ENST00000522089 237 ntBASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 MIR3129-201ENST00000581095 76 ntBASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 MIR3616-201ENST00000584070 92 ntBASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 AL591424.2-201ENST00000617023 128 ntBASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TMEM259Q4ZIN3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 MIR126-201ENST00000362291 85 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 Y_RNA.52-201ENST00000362760 96 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 Y_RNA.66-201ENST00000362862 102 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 RNU6-647P-201ENST00000364243 107 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 SNORD114-6-201ENST00000364393 72 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 SNORA8-201ENST00000384574 139 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 SNORA40.5-201ENST00000391061 128 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 MTATP6P21-201ENST00000440681 189 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 RNU2-60P-201ENST00000517290 128 ntBASIC3.79□□□□□ -1.8
TMEM259Q4ZIN3 AC007751.1-201ENST00000529260 376 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms