Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 RNU6-1175P-201ENST00000365200 107 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.518-201ENST00000384552 113 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.541-201ENST00000384640 113 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 MT-TG-201ENST00000387429 68 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 RNU2-38P-201ENST00000410856 79 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 RNU6-1132P-201ENST00000459214 107 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 SEPT14P8-201ENST00000508026 178 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 SNORD113-5-201ENST00000607261 78 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.65□□□□□ -1.99
LONRF3Q496Y0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LONRF3Q496Y0 ZNF702P-202ENST00000434269 1966 ntBASIC2.65□□□□□ -1.99
LONRF3Q496Y0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LONRF3Q496Y0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LONRF3Q496Y0 RNU6-545P-201ENST00000362681 104 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 SNORD81.1-201ENST00000363064 77 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.286-201ENST00000364813 102 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 SNORA72.2-201ENST00000365028 127 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 RNU6-21P-201ENST00000384710 107 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 RNA5SP450-201ENST00000411206 102 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 AL390729.2-201ENST00000416137 156 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.64□□□□□ -1.99
LONRF3Q496Y0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.64□□□□□ -1.99
LONRF3Q496Y0 HSPE1P25-201ENST00000455484 251 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 ATP5EP1-201ENST00000510257 156 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 AC107222.1-201ENST00000510899 637 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 RNA5SP281-201ENST00000516504 135 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 RNU6-1271P-201ENST00000517049 105 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.64□□□□□ -1.99
LONRF3Q496Y0 AC004467.1-201ENST00000615678 330 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 AC008873.1-201ENST00000625051 138 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 MIR3674-201ENST00000636576 68 ntBASIC2.64□□□□□ -1.99
LONRF3Q496Y0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.64□□□□□ -1.99
LONRF3Q496Y0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
LONRF3Q496Y0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.16-201ENST00000362421 102 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 RNU4-90P-201ENST00000362773 141 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.237-201ENST00000364439 102 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 RNU6-160P-201ENST00000384591 107 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 AC018634.1-201ENST00000437554 401 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 AL353689.1-201ENST00000438895 199 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 YWHAEP4-201ENST00000505390 198 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.63□□□□□ -1.99
LONRF3Q496Y0 DEFB108E-201ENST00000524692 240 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 AL109918.3-201ENST00000603072 338 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 AC022441.3-201ENST00000605737 136 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 AC103810.6-201ENST00000606708 136 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 AL627230.6-201ENST00000611129 280 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 AC091932.3-201ENST00000624223 323 ntBASIC2.63□□□□□ -1.99
LONRF3Q496Y0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LONRF3Q496Y0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LONRF3Q496Y0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.63□□□□□ -1.99
LONRF3Q496Y0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
LONRF3Q496Y0 MTND5P6-201ENST00000422338 1798 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 MIR410-201ENST00000362222 80 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.14-201ENST00000362415 103 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.101-201ENST00000363154 102 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 RNU6-23P-201ENST00000363283 107 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.447-201ENST00000384184 113 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 MIR597-201ENST00000384968 97 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 MIR586-201ENST00000385035 97 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 RNA5SP475-201ENST00000410568 110 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 RPS15AP28-201ENST00000435088 386 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 HMGB3P17-201ENST00000504195 649 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 RNU6-1338P-201ENST00000516328 91 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 RNU6-966P-201ENST00000516479 104 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 AC104984.5-201ENST00000586878 94 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 AC012433.1-201ENST00000588916 398 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.62□□□□□ -1.99
LONRF3Q496Y0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
LONRF3Q496Y0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LONRF3Q496Y0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LONRF3Q496Y0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LONRF3Q496Y0 AL391987.6-201ENST00000305671 199 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 U3.8-201ENST00000363675 217 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 RNU6-290P-201ENST00000365212 101 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.331-201ENST00000365267 102 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.350-201ENST00000365409 98 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 Y_RNA.562-201ENST00000384695 113 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 MIR548B-201ENST00000385247 97 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LONRF3Q496Y0 RNA5SP465-201ENST00000391195 109 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 MIR1283-1-201ENST00000408494 87 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 RPL23AP36-201ENST00000413895 458 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 AL158823.1-201ENST00000418441 478 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 HMGN2P3-201ENST00000433603 273 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 HMGN2P5-201ENST00000436882 273 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 RPL23AP3-201ENST00000453844 468 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 HMGN2P9-201ENST00000476875 229 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 RPS29P21-201ENST00000496272 170 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.61□□□□□ -1.99
LONRF3Q496Y0 AC006001.4-201ENST00000622243 395 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 AC127459.3-201ENST00000624328 466 ntBASIC2.61□□□□□ -1.99
LONRF3Q496Y0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.6□□□□□ -1.99
LONRF3Q496Y0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.6□□□□□ -1.99
LONRF3Q496Y0 MIR335-201ENST00000362173 94 ntBASIC2.6□□□□□ -1.99
LONRF3Q496Y0 MIR300-201ENST00000401138 83 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms