Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SNORD19.2-201ENST00000516978 73 ntBASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.08□□□□□ -1.76
CTC1Q2NKJ3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 RNU6-888P-201ENST00000363010 101 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 RNU1-18P-201ENST00000363062 164 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 ATP5A1P2-201ENST00000412323 255 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 AC083863.1-201ENST00000438811 231 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 AC115115.1-201ENST00000449927 248 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 snoU13.28-201ENST00000459235 104 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 AC113410.1-201ENST00000505029 247 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 RNU6-693P-201ENST00000516134 107 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 Y_RNA.666-201ENST00000516187 112 ntBASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTC1Q2NKJ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 Y_RNA.4-201ENST00000362333 112 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 RNU6-349P-201ENST00000362402 107 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 HMGN2P8-201ENST00000391458 268 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 Y_RNA.620-201ENST00000411009 88 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 AP002884.2-201ENST00000471647 395 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 NDUFA4P2-201ENST00000489989 244 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 KRTAP13-6P-201ENST00000508999 371 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 AC011604.1-201ENST00000545978 196 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 MIR4668-201ENST00000582284 70 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 AC010733.2-201ENST00000589496 5702 ntBASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.06□□□□□ -1.76
CTC1Q2NKJ3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 snoU2_19.1-201ENST00000362361 80 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 RNY1P4-201ENST00000384595 115 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 MIR490-201ENST00000384865 128 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 MIR548A2-201ENST00000384956 97 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 MIR577-201ENST00000385196 96 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 SNORA48.2-201ENST00000390926 124 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 HMGN2P7-201ENST00000456186 273 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 RN7SL601P-201ENST00000471221 293 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 MIR5197-201ENST00000583721 112 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 HMGN2P15-201ENST00000585707 270 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 RPS15AP11-201ENST00000594193 385 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 AC091304.10-201ENST00000641554 121 ntBASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.05□□□□□ -1.76
CTC1Q2NKJ3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 RNU6-832P-201ENST00000363319 107 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 Y_RNA.191-201ENST00000363972 113 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 RNU6-60P-201ENST00000364792 103 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 Y_RNA.454-201ENST00000384224 113 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 RNU6-748P-201ENST00000384648 107 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 MIR199A2-201ENST00000385289 110 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 RNU6-57P-201ENST00000411348 103 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 AC063976.3-201ENST00000426849 329 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 AC009238.1-201ENST00000442165 424 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 AC009237.6-201ENST00000446969 424 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 RPS3P1-201ENST00000456781 192 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 RNA5SP164-201ENST00000516533 110 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 AC068657.1-201ENST00000520807 306 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 MIR4777-201ENST00000583710 86 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 MIR3117-201ENST00000584034 78 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 AC091152.3-201ENST00000604227 325 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 RNU6-91P-201ENST00000607774 107 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTC1Q2NKJ3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 Y_RNA.155-201ENST00000363632 101 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 SNORD24-201ENST00000383884 75 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 RNY1P6-201ENST00000384193 109 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 CYCSP4-201ENST00000429682 331 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 RPS12P18-201ENST00000442381 270 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 SNORD105B-201ENST00000458770 79 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 snoU13.14-201ENST00000459372 104 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 RNU6-1098P-201ENST00000516772 96 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 MIR4694-201ENST00000578534 80 ntBASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.03□□□□□ -1.76
CTC1Q2NKJ3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.03□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms