Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC091144.1-201ENST00000519573 138 ntBASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 AC093023.1-201ENST00000547375 507 ntBASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 AC100812.1-201ENST00000607622 580 ntBASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 MIR6078-201ENST00000611069 100 ntBASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 AC010999.1-201ENST00000611856 324 ntBASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 AC008873.1-201ENST00000625051 138 ntBASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SHROOM1Q2M3G4 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 RNA5SP323-201ENST00000391094 133 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 SNORA75.4-201ENST00000391278 119 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-1001P-201ENST00000411265 100 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 AC092423.1-201ENST00000430165 186 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 AC005002.2-201ENST00000438228 269 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 AC046134.1-201ENST00000514454 666 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 RNA5SP481-201ENST00000516814 122 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 FRG2DP-202ENST00000566967 323 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 AC100821.1-201ENST00000523153 2479 ntBASIC1.46□□□□□ -2.18
SHROOM1Q2M3G4 Y_RNA.279-201ENST00000364763 95 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 SNORD81.2-201ENST00000365153 76 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-1240P-201ENST00000365155 104 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-281P-201ENST00000384212 103 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 Y_RNA.482-201ENST00000384377 111 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNA5SP109-201ENST00000391010 116 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-700P-201ENST00000391043 107 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR190B-201ENST00000401119 79 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-1186P-201ENST00000410429 97 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 JTBP1-201ENST00000441314 247 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-221P-201ENST00000459541 99 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR5701-3-201ENST00000578890 82 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR5701-1-201ENST00000585138 82 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR1244-1-201ENST00000612829 85 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR5701-2-201ENST00000615634 82 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR1244-3-201ENST00000635744 85 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR1244-2-201ENST00000636449 85 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 MIR1244-4-202ENST00000636813 85 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 TPTEP1-208ENST00000636884 213 ntBASIC1.45□□□□□ -2.18
SHROOM1Q2M3G4 RNA5SP361-201ENST00000362686 118 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-879P-201ENST00000364328 108 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 Y_RNA.358-201ENST00000365491 99 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 Y_RNA.557-201ENST00000384680 107 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 MIR1185-2-201ENST00000408687 86 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 AL163195.1-201ENST00000496941 348 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 MIR4452-201ENST00000583004 71 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 SNORA4-201ENST00000584302 138 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 AC136443.5-201ENST00000603741 370 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 AL353149.1-201ENST00000610667 244 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 MIR8063-201ENST00000621930 81 ntBASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SHROOM1Q2M3G4 U3.8-201ENST00000363675 217 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-137P-201ENST00000363680 108 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RNU1-93P-201ENST00000364704 169 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-593P-201ENST00000364716 112 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 SNORA25.8-201ENST00000364831 128 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 Y_RNA.390-201ENST00000383932 102 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-370P-201ENST00000411008 104 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC069257.2-201ENST00000441819 155 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AL606517.2-201ENST00000442855 241 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RPS26P55-201ENST00000471178 356 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC093303.1-201ENST00000514549 295 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-1114P-201ENST00000516022 107 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC022868.1-201ENST00000517767 391 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC090821.2-201ENST00000523552 176 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC125232.2-201ENST00000592457 143 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AC073413.2-201ENST00000604332 360 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AL357075.2-201ENST00000614906 189 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AL669831.3-213ENST00000636676 183 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
SHROOM1Q2M3G4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 SNORA63D-201ENST00000364359 132 ntBASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 RNU6-99P-201ENST00000364721 107 ntBASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 Y_RNA.490-201ENST00000384413 102 ntBASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 AC010154.1-201ENST00000425857 269 ntBASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 MTND4P18-201ENST00000447010 465 ntBASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.42□□□□□ -2.18
SHROOM1Q2M3G4 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms