Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC092185.1-201ENST00000491371 97 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 FCF1P8-201ENST00000510322 597 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 AC104619.4-201ENST00000510773 249 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 Y_RNA.692-201ENST00000516627 105 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 MIR2276-201ENST00000516886 89 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 AC026403.1-201ENST00000518938 295 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH1Q08174 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDH1Q08174 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH1Q08174 AC138915.1-201ENST00000565427 1685 ntBASIC3.32□□□□□ -1.88
PCDH1Q08174 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH1Q08174 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDH1Q08174 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PCDH1Q08174 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PCDH1Q08174 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH1Q08174 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDH1Q08174 AC080128.1-201ENST00000474389 1917 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 U8.1-201ENST00000362843 134 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 Y_RNA.120-201ENST00000363304 110 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 RNU6-525P-201ENST00000363685 104 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 SNORA73.2-201ENST00000364946 201 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 RNU6-805P-201ENST00000365643 106 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 RNU6-429P-201ENST00000384582 108 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 AC063976.3-201ENST00000426849 329 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 MTCO1P44-201ENST00000441935 243 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 AC025750.2-201ENST00000442609 450 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 AL357134.1-201ENST00000445848 426 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 PRELID2P1-201ENST00000552837 301 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDH1Q08174 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDH1Q08174 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH1Q08174 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH1Q08174 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH1Q08174 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDH1Q08174 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.31□□□□□ -1.88
PCDH1Q08174 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH1Q08174 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDH1Q08174 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDH1Q08174 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH1Q08174 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH1Q08174 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH1Q08174 Y_RNA.91-201ENST00000363042 107 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 Y_RNA.634-201ENST00000364811 113 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 CD24P4-201ENST00000382840 243 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 RNU6-1144P-201ENST00000384247 104 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 MIR218-2-201ENST00000385006 110 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 SNORA48.8-201ENST00000391324 134 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDH1Q08174 SNORD11-201ENST00000459124 84 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 RPS29P21-201ENST00000496272 170 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 AC011604.1-201ENST00000545978 196 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 AC131055.1-201ENST00000584626 316 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 AC097639.2-201ENST00000603159 172 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 MIR6129-201ENST00000616087 109 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 MIR5739-201ENST00000619803 80 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 AC073476.4-201ENST00000628409 72 ntBASIC3.3□□□□□ -1.88
PCDH1Q08174 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PCDH1Q08174 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH1Q08174 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDH1Q08174 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH1Q08174 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PCDH1Q08174 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH1Q08174 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH1Q08174 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH1Q08174 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH1Q08174 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDH1Q08174 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 RNU6-1209P-201ENST00000363655 107 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 RNU6-743P-201ENST00000364151 106 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 Y_RNA.796-201ENST00000364268 102 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 Y_RNA.799-201ENST00000364992 102 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 SNORD17-201ENST00000390930 237 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 RNU1-101P-201ENST00000391171 127 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 FO393413.1-201ENST00000402892 195 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 RPS29P4-201ENST00000414733 161 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH1Q08174 RN7SL442P-201ENST00000473804 320 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 YWHAEP4-201ENST00000505390 198 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 SNORA4.4-201ENST00000515921 135 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 RNU6-772P-201ENST00000516042 105 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 AC012314.7-201ENST00000619693 93 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH1Q08174 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDH1Q08174 MIR3914-2-201ENST00000637339 95 ntBASIC3.29□□□□□ -1.88
PCDH1Q08174 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDH1Q08174 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PCDH1Q08174 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDH1Q08174 RNA5SP119-201ENST00000362715 117 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 Y_RNA.111-201ENST00000363248 100 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 RNA5SP72-201ENST00000364442 117 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 Y_RNA.280-201ENST00000364765 112 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 RNY4P18-201ENST00000391107 89 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 SNORA26-201ENST00000391286 122 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 AC093578.1-201ENST00000415219 368 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 RPL23AP83-201ENST00000434984 473 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 RPL39P40-201ENST00000445481 146 ntBASIC3.28□□□□□ -1.88
PCDH1Q08174 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms