Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AC005908.1-201ENST00000468701 347 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 RPL17P19-201ENST00000489069 552 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.5□□□□□ -2.17
GABPAQ06546 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 Y_RNA.691-201ENST00000516611 103 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AC105029.1-201ENST00000520250 669 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.5□□□□□ -2.17
GABPAQ06546 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.5□□□□□ -2.17
GABPAQ06546 AC016925.2-201ENST00000605108 242 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AL669831.3-213ENST00000636676 183 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 AC099654.14-201ENST00000638599 341 ntBASIC1.5□□□□□ -2.17
GABPAQ06546 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
GABPAQ06546 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
GABPAQ06546 SNORA72.2-201ENST00000365028 127 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 RNU6-370P-201ENST00000411008 104 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 EIF1P2-201ENST00000428233 350 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 RNU1-98P-201ENST00000458992 160 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 HMGN1P7-201ENST00000491722 313 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 HMGN1P12-201ENST00000499125 195 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 RNU1-142P-201ENST00000516682 145 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 AC022868.1-201ENST00000517767 391 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 FRG2DP-202ENST00000566967 323 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 AC004584.2-201ENST00000570407 410 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 AC073413.2-201ENST00000604332 360 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 MIR1244-1-201ENST00000612829 85 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.49□□□□□ -2.17
GABPAQ06546 MIR1244-3-201ENST00000635744 85 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 MIR1244-2-201ENST00000636449 85 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 MIR1244-4-202ENST00000636813 85 ntBASIC1.49□□□□□ -2.17
GABPAQ06546 AC100821.1-201ENST00000523153 2479 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
GABPAQ06546 RNU6-99P-201ENST00000364721 107 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 MIR329-1-201ENST00000385028 80 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 RNU6-1186P-201ENST00000410429 97 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 FTH1P12-201ENST00000432137 551 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 RBMX2P4-201ENST00000441256 376 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.48□□□□□ -2.17
GABPAQ06546 UBE2V1P7-201ENST00000446395 340 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 RPL26P26-201ENST00000480251 434 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 AL163195.1-201ENST00000496941 348 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.48□□□□□ -2.17
GABPAQ06546 SNORA20.3-201ENST00000516880 132 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 RNU6-264P-201ENST00000517134 104 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 AC027419.1-201ENST00000522976 328 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 MIR5690-201ENST00000583739 73 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 AC125232.2-201ENST00000592457 143 ntBASIC1.48□□□□□ -2.17
GABPAQ06546 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.48□□□□□ -2.17
GABPAQ06546 SNORA4.2-201ENST00000365313 147 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 Y_RNA.390-201ENST00000383932 102 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 COX6CP10-201ENST00000416832 224 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 JTBP1-201ENST00000441314 247 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 UQCRBP2-201ENST00000447827 297 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.47□□□□□ -2.17
GABPAQ06546 U8.22-201ENST00000459141 133 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 RNU6-120P-201ENST00000516077 103 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 CYCSP23-201ENST00000519781 313 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 AC024995.1-201ENST00000523014 93 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 SNORA77B-201ENST00000578179 125 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.47□□□□□ -2.17
GABPAQ06546 AL355073.2-201ENST00000612106 557 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 AL359075.3-201ENST00000613288 217 ntBASIC1.47□□□□□ -2.17
GABPAQ06546 RNA5SP361-201ENST00000362686 118 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 RNU1-22P-201ENST00000363334 158 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 MIR499A-201ENST00000384903 122 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 RNA5SP109-201ENST00000391010 116 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 MIR1287-201ENST00000408492 90 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 Y_RNA.646-201ENST00000410980 101 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 AC005002.2-201ENST00000438228 269 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.46□□□□□ -2.18
GABPAQ06546 SNORD65B-201ENST00000459126 73 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 snoU13.27-201ENST00000459278 104 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 MIR2053-201ENST00000459295 91 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 Y_RNA.673-201ENST00000516306 88 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 APOOP3-201ENST00000536787 586 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 AL137100.2-201ENST00000555786 315 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 MIR8063-201ENST00000621930 81 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 AC095038.3-201ENST00000634439 195 ntBASIC1.46□□□□□ -2.18
GABPAQ06546 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
GABPAQ06546 RNU6-1145P-201ENST00000384246 107 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 Y_RNA.498-201ENST00000384460 102 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 RNU6-310P-201ENST00000384655 107 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 AC114482.1-201ENST00000418010 247 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.45□□□□□ -2.18
GABPAQ06546 PCNPP5-201ENST00000452246 481 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 RPL30P15-201ENST00000457129 321 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 RNA5SP102-201ENST00000516865 106 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.45□□□□□ -2.18
GABPAQ06546 AC104260.1-201ENST00000616660 539 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.45□□□□□ -2.18
GABPAQ06546 RNU6-1188P-201ENST00000363795 107 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.44□□□□□ -2.18
GABPAQ06546 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.44□□□□□ -2.18
GABPAQ06546 AC022493.2-201ENST00000506122 481 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 RNU6-559P-201ENST00000516151 98 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms