Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 AC090517.3-201ENST00000625170 141 ntBASIC3.04□□□□□ -1.92
NKX3-2P78367 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NKX3-2P78367 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.03□□□□□ -1.92
NKX3-2P78367 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
NKX3-2P78367 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NKX3-2P78367 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX3-2P78367 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NKX3-2P78367 Y_RNA.24-201ENST00000362508 103 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 RNU1-105P-201ENST00000363470 161 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 SNORA51.4-201ENST00000364993 124 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 SNORA70B-201ENST00000384210 135 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 Y_RNA.497-201ENST00000384447 98 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 MIR586-201ENST00000385035 97 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 SNORA26.7-201ENST00000391288 122 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 RNU7-141P-201ENST00000459304 62 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 SCARNA8-201ENST00000515924 131 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 RNA5SP272-201ENST00000516095 111 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 RNU5F-4P-201ENST00000516581 114 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 RNU6-453P-201ENST00000516819 85 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.03□□□□□ -1.92
NKX3-2P78367 AC103810.1-201ENST00000579873 453 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 MIR548AI-201ENST00000579940 88 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 AC090616.3-201ENST00000582184 217 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX3-2P78367 AL713866.2-201ENST00000603579 219 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX3-2P78367 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.03□□□□□ -1.92
NKX3-2P78367 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NKX3-2P78367 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.03□□□□□ -1.92
NKX3-2P78367 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
NKX3-2P78367 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
NKX3-2P78367 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX3-2P78367 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NKX3-2P78367 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX3-2P78367 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.02□□□□□ -1.93
NKX3-2P78367 Y_RNA.124-201ENST00000363339 93 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 RNU6-899P-201ENST00000363947 107 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 Y_RNA.456-201ENST00000384232 111 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 Y_RNA.488-201ENST00000384403 102 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 MIR1185-2-201ENST00000408687 86 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX3-2P78367 AC244505.4-201ENST00000434905 287 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 SSXP5-201ENST00000443473 287 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 SRIP1-201ENST00000489235 288 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX3-2P78367 MIR4744-201ENST00000581563 82 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX3-2P78367 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.02□□□□□ -1.93
NKX3-2P78367 AC025754.2-201ENST00000606491 432 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 AC002064.3-201ENST00000623448 346 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 CTSLP2-204ENST00000629029 392 ntBASIC3.02□□□□□ -1.93
NKX3-2P78367 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.02□□□□□ -1.93
NKX3-2P78367 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NKX3-2P78367 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NKX3-2P78367 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.01□□□□□ -1.93
NKX3-2P78367 RNU6-151P-201ENST00000364158 107 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 Y_RNA.215-201ENST00000364204 112 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 U8.9-201ENST00000365667 134 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 SNORA8.3-201ENST00000384679 139 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 Y_RNA.568-201ENST00000384742 113 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 RNU6-578P-201ENST00000390980 103 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 RNA5SP354-201ENST00000391247 136 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 AL355497.1-201ENST00000406262 551 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 UQCRHP3-201ENST00000451503 251 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 TRBV12-1-201ENST00000479785 344 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.01□□□□□ -1.93
NKX3-2P78367 AC005840.1-201ENST00000498412 377 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 MRPS36P2-201ENST00000512569 299 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 RN7SKP164-201ENST00000516138 266 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.01□□□□□ -1.93
NKX3-2P78367 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.01□□□□□ -1.93
NKX3-2P78367 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NKX3-2P78367 RNU6-944P-201ENST00000364023 107 ntBASIC3□□□□□ -1.93
NKX3-2P78367 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
NKX3-2P78367 Y_RNA.343-201ENST00000365354 112 ntBASIC3□□□□□ -1.93
NKX3-2P78367 RNU6-969P-201ENST00000383900 105 ntBASIC3□□□□□ -1.93
NKX3-2P78367 MIR29B2-201ENST00000385055 81 ntBASIC3□□□□□ -1.93
NKX3-2P78367 AL355796.1-201ENST00000406706 323 ntBASIC3□□□□□ -1.93
NKX3-2P78367 AL162725.1-201ENST00000435405 301 ntBASIC3□□□□□ -1.93
NKX3-2P78367 CR769767.1-201ENST00000436337 346 ntBASIC3□□□□□ -1.93
NKX3-2P78367 Z96811.1-201ENST00000445880 108 ntBASIC3□□□□□ -1.93
NKX3-2P78367 RNU7-14P-201ENST00000459331 62 ntBASIC3□□□□□ -1.93
NKX3-2P78367 AC003982.1-202ENST00000469928 248 ntBASIC3□□□□□ -1.93
NKX3-2P78367 YWHAEP4-201ENST00000505390 198 ntBASIC3□□□□□ -1.93
NKX3-2P78367 RNU6-426P-201ENST00000516464 97 ntBASIC3□□□□□ -1.93
NKX3-2P78367 RNA5SP24-201ENST00000516478 95 ntBASIC3□□□□□ -1.93
NKX3-2P78367 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3□□□□□ -1.93
NKX3-2P78367 ZNF861P-201ENST00000588126 639 ntBASIC3□□□□□ -1.93
NKX3-2P78367 AC023043.3-201ENST00000593113 385 ntBASIC3□□□□□ -1.93
NKX3-2P78367 RPL17P51-201ENST00000605218 238 ntBASIC3□□□□□ -1.93
NKX3-2P78367 Y_RNA.802-201ENST00000614892 130 ntBASIC3□□□□□ -1.93
NKX3-2P78367 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
NKX3-2P78367 Y_RNA.778-201ENST00000620203 90 ntBASIC3□□□□□ -1.93
NKX3-2P78367 AC110079.1-202ENST00000635213 138 ntBASIC3□□□□□ -1.93
NKX3-2P78367 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NKX3-2P78367 RNU1-72P-201ENST00000362976 153 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 SNORD14D-201ENST00000384390 87 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 RNU6-1274P-201ENST00000384557 107 ntBASIC2.99□□□□□ -1.93
NKX3-2P78367 RNU6-239P-201ENST00000390990 99 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms