Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 UBE2WP1-201ENST00000362030 340 ntBASIC1.85□□□□□ -2.11
LMO4P61968 RNU1-62P-201ENST00000362599 164 ntBASIC1.85□□□□□ -2.11
LMO4P61968 RNU4-15P-201ENST00000362613 141 ntBASIC1.85□□□□□ -2.11
LMO4P61968 Y_RNA.122-201ENST00000363331 96 ntBASIC1.85□□□□□ -2.11
LMO4P61968 RNU6-1210P-201ENST00000363775 107 ntBASIC1.85□□□□□ -2.11
LMO4P61968 Y_RNA.292-201ENST00000364904 97 ntBASIC1.85□□□□□ -2.11
LMO4P61968 SNORA72.2-201ENST00000365028 127 ntBASIC1.85□□□□□ -2.11
LMO4P61968 RNU2-61P-201ENST00000411069 191 ntBASIC1.85□□□□□ -2.11
LMO4P61968 RPL23AP36-201ENST00000413895 458 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.85□□□□□ -2.11
LMO4P61968 AC104332.1-201ENST00000440471 797 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC009238.1-201ENST00000442165 424 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC009237.6-201ENST00000446969 424 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC009237.7-201ENST00000447357 229 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC005042.3-201ENST00000453230 174 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.85□□□□□ -2.11
LMO4P61968 AC107393.1-201ENST00000512403 346 ntBASIC1.85□□□□□ -2.11
LMO4P61968 SNORA48.11-201ENST00000517015 89 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.85□□□□□ -2.11
LMO4P61968 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.85□□□□□ -2.11
LMO4P61968 MIR3670-2-201ENST00000582974 65 ntBASIC1.85□□□□□ -2.11
LMO4P61968 MIR4282-201ENST00000583613 67 ntBASIC1.85□□□□□ -2.11
LMO4P61968 MIR3670-1-201ENST00000584160 65 ntBASIC1.85□□□□□ -2.11
LMO4P61968 MIR3670-3-201ENST00000584855 65 ntBASIC1.85□□□□□ -2.11
LMO4P61968 SNORD14A-201ENST00000606526 91 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.85□□□□□ -2.11
LMO4P61968 MIR3670-4-201ENST00000612260 65 ntBASIC1.85□□□□□ -2.11
LMO4P61968 PCGEM1.1-201ENST00000613431 131 ntBASIC1.85□□□□□ -2.11
LMO4P61968 MIR7843-201ENST00000622274 79 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC091932.3-201ENST00000624223 323 ntBASIC1.85□□□□□ -2.11
LMO4P61968 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.85□□□□□ -2.11
LMO4P61968 FO624990.1-201ENST00000636373 85 ntBASIC1.85□□□□□ -2.11
LMO4P61968 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.85□□□□□ -2.11
LMO4P61968 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
LMO4P61968 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.85□□□□□ -2.11
LMO4P61968 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.85□□□□□ -2.11
LMO4P61968 SNORD114-1-201ENST00000362705 72 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.82-201ENST00000363000 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.92-201ENST00000363043 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 SNORA25.6-201ENST00000364121 118 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.235-201ENST00000364412 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.306-201ENST00000365015 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.312-201ENST00000365089 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.322-201ENST00000365151 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 RNU6-47P-201ENST00000383866 107 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.415-201ENST00000384012 112 ntBASIC1.84□□□□□ -2.11
LMO4P61968 RNU6-1289P-201ENST00000384431 106 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.498-201ENST00000384460 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
LMO4P61968 MIR504-201ENST00000385065 83 ntBASIC1.84□□□□□ -2.11
LMO4P61968 SNORA46.1-201ENST00000391069 153 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.590-201ENST00000410140 107 ntBASIC1.84□□□□□ -2.11
LMO4P61968 RNU6-1199P-201ENST00000411249 104 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.650-201ENST00000459002 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 RNU7-120P-201ENST00000459334 63 ntBASIC1.84□□□□□ -2.11
LMO4P61968 COX6CP14-201ENST00000469580 174 ntBASIC1.84□□□□□ -2.11
LMO4P61968 AL121594.1-201ENST00000475906 575 ntBASIC1.84□□□□□ -2.11
LMO4P61968 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.84□□□□□ -2.11
LMO4P61968 SNORA27.4-201ENST00000516650 95 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.777-201ENST00000516982 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 RNU6-586P-201ENST00000517265 104 ntBASIC1.84□□□□□ -2.11
LMO4P61968 CYCSP23-201ENST00000519781 313 ntBASIC1.84□□□□□ -2.11
LMO4P61968 AP002392.1-201ENST00000537692 208 ntBASIC1.84□□□□□ -2.11
LMO4P61968 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.84□□□□□ -2.11
LMO4P61968 AC004486.1-201ENST00000546846 233 ntBASIC1.84□□□□□ -2.11
LMO4P61968 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.84□□□□□ -2.11
LMO4P61968 MIR3145-201ENST00000580727 82 ntBASIC1.84□□□□□ -2.11
LMO4P61968 AL512605.2-201ENST00000592972 256 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.771-201ENST00000598668 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 AC004467.1-201ENST00000615678 330 ntBASIC1.84□□□□□ -2.11
LMO4P61968 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.84□□□□□ -2.11
LMO4P61968 Y_RNA.789-201ENST00000622480 102 ntBASIC1.84□□□□□ -2.11
LMO4P61968 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.84□□□□□ -2.11
LMO4P61968 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.84□□□□□ -2.11
LMO4P61968 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LMO4P61968 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.83□□□□□ -2.12
LMO4P61968 AC080100.1-201ENST00000624239 5356 ntBASIC1.83□□□□□ -2.12
LMO4P61968 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
LMO4P61968 RNU4-80P-201ENST00000363200 141 ntBASIC1.83□□□□□ -2.12
LMO4P61968 RNU6-682P-201ENST00000363843 106 ntBASIC1.83□□□□□ -2.12
LMO4P61968 RNU1-51P-201ENST00000365345 176 ntBASIC1.83□□□□□ -2.12
LMO4P61968 RNU6-662P-201ENST00000384253 104 ntBASIC1.83□□□□□ -2.12
LMO4P61968 MIR561-201ENST00000385216 97 ntBASIC1.83□□□□□ -2.12
LMO4P61968 RNU6-493P-201ENST00000391321 108 ntBASIC1.83□□□□□ -2.12
LMO4P61968 MIR548M-201ENST00000408260 86 ntBASIC1.83□□□□□ -2.12
LMO4P61968 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.83□□□□□ -2.12
LMO4P61968 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.83□□□□□ -2.12
LMO4P61968 NDUFB4P10-201ENST00000452541 359 ntBASIC1.83□□□□□ -2.12
LMO4P61968 SNORD2.1-201ENST00000458762 69 ntBASIC1.83□□□□□ -2.12
LMO4P61968 AC145146.1-201ENST00000496370 254 ntBASIC1.83□□□□□ -2.12
LMO4P61968 RNU6-155P-201ENST00000516347 100 ntBASIC1.83□□□□□ -2.12
LMO4P61968 RNA5SP200-201ENST00000516360 103 ntBASIC1.83□□□□□ -2.12
LMO4P61968 Y_RNA.679-201ENST00000516416 91 ntBASIC1.83□□□□□ -2.12
LMO4P61968 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
LMO4P61968 AC026470.2-201ENST00000561492 181 ntBASIC1.83□□□□□ -2.12
LMO4P61968 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.83□□□□□ -2.12
LMO4P61968 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.83□□□□□ -2.12
LMO4P61968 Z83818.1-201ENST00000603584 150 ntBASIC1.83□□□□□ -2.12
LMO4P61968 SNRPGP20-201ENST00000604477 205 ntBASIC1.83□□□□□ -2.12
LMO4P61968 AC245884.12-201ENST00000615364 59 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms