Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR153-2-201ENST00000385225 87 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 CALM2P4-201ENST00000430810 426 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.65□□□□□ -2.31
CLDN6P56747 MRPS10P1-201ENST00000448483 130 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 RNU6-956P-201ENST00000458868 103 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 RNU6-261P-201ENST00000459506 102 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 RPS27P22-201ENST00000478056 241 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 RN7SKP298-201ENST00000515950 94 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 AC023157.2-201ENST00000540596 141 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 AL158063.1-201ENST00000615349 536 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 AC091925.1-201ENST00000623204 462 ntBASIC0.65□□□□□ -2.31
CLDN6P56747 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CLDN6P56747 SNORD113-7-201ENST00000363762 77 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 Y_RNA.251-201ENST00000364551 99 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 SNORA2.2-201ENST00000365473 135 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 SNORA69-201ENST00000383895 132 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 MIR605-201ENST00000385078 83 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 U8.16-201ENST00000391279 133 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 MIR1197-201ENST00000408818 88 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 MTND3P16-201ENST00000452205 344 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 AC093850.1-201ENST00000454121 251 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.64□□□□□ -2.31
CLDN6P56747 RNU7-187P-201ENST00000458985 68 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 AC083798.1-201ENST00000472671 131 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 RPS26P48-201ENST00000491713 339 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
CLDN6P56747 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.64□□□□□ -2.31
CLDN6P56747 MIR4760-201ENST00000585040 80 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 AP001330.5-201ENST00000607176 411 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 MIR924-201ENST00000638017 53 ntBASIC0.64□□□□□ -2.31
CLDN6P56747 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 Y_RNA.100-201ENST00000363141 102 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 Y_RNA.167-201ENST00000363735 109 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 RNU6-541P-201ENST00000384709 110 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 MTCO1P20-201ENST00000425366 358 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.63□□□□□ -2.31
CLDN6P56747 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.63□□□□□ -2.31
CLDN6P56747 AC091179.3-201ENST00000474761 144 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 AC010469.2-201ENST00000496412 480 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 AC022493.2-201ENST00000506122 481 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 AC105313.1-201ENST00000509121 353 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 RNU2-56P-201ENST00000516826 190 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 AC104383.1-201ENST00000530297 370 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 AC027288.2-201ENST00000553028 243 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 MIR8087-201ENST00000612745 78 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.63□□□□□ -2.31
CLDN6P56747 MIR6079-201ENST00000635807 62 ntBASIC0.63□□□□□ -2.31
CLDN6P56747 RNA5SP361-201ENST00000362686 118 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CLDN6P56747 RNU6-793P-201ENST00000384233 104 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 RPS26P5-201ENST00000418544 335 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 AC104332.1-201ENST00000440471 797 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 MTND4P18-201ENST00000447010 465 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 SNORD65B-201ENST00000459126 73 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.62□□□□□ -2.31
CLDN6P56747 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 AP002001.1-203ENST00000534002 267 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 AC009229.3-201ENST00000608056 282 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 AC097520.1-201ENST00000624435 385 ntBASIC0.62□□□□□ -2.31
CLDN6P56747 AC121333.1-201ENST00000567488 2709 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 RNU6-1322P-201ENST00000364309 107 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 MIR514A2-201ENST00000385131 88 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 MIR514A3-201ENST00000385132 88 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 CALM2P3-201ENST00000400429 449 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 RPL30P16-201ENST00000419341 429 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 MTCO3P18-201ENST00000440206 761 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.61□□□□□ -2.31
CLDN6P56747 RNU7-90P-201ENST00000459216 62 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 RNU7-21P-201ENST00000459430 62 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 AC083904.1-201ENST00000487828 231 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 MTCO2P30-201ENST00000503662 364 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.61□□□□□ -2.31
CLDN6P56747 RNU7-12P-201ENST00000516030 62 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.61□□□□□ -2.31
CLDN6P56747 UBL5P4-201ENST00000562584 236 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 AL158209.2-201ENST00000619266 216 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 AC006435.5-201ENST00000624486 112 ntBASIC0.61□□□□□ -2.31
CLDN6P56747 Y_RNA.151-201ENST00000363566 112 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 RNU6-137P-201ENST00000363680 108 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 RNU5F-3P-201ENST00000363767 117 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 Y_RNA.184-201ENST00000363884 108 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 RNU6-280P-201ENST00000364145 104 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 RNU6-128P-201ENST00000383976 107 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 Y_RNA.409-201ENST00000383990 98 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 SNORD116-13-201ENST00000384408 92 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 SNORA75.2-201ENST00000391138 150 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 SNORA75.3-201ENST00000391231 150 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.6□□□□□ -2.31
CLDN6P56747 RPEP5-201ENST00000441137 268 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.6□□□□□ -2.31
CLDN6P56747 PCMTD1P1-201ENST00000455560 355 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 LINC01399-202ENST00000458450 244 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 OR9P1P-201ENST00000496431 281 ntBASIC0.6□□□□□ -2.31
CLDN6P56747 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.6□□□□□ -2.31
CLDN6P56747 POLR3GP2-201ENST00000588366 668 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 182.7 ms