Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CDH13P55290 Y_RNA.58-201ENST00000362807 102 ntBASIC1.69□□□□□ -2.14
CDH13P55290 Y_RNA.154-201ENST00000363624 102 ntBASIC1.69□□□□□ -2.14
CDH13P55290 SNORA33-201ENST00000363664 130 ntBASIC1.69□□□□□ -2.14
CDH13P55290 Y_RNA.252-201ENST00000364556 101 ntBASIC1.69□□□□□ -2.14
CDH13P55290 RNY3P1-201ENST00000365085 102 ntBASIC1.69□□□□□ -2.14
CDH13P55290 RNY3-201ENST00000365484 102 ntBASIC1.69□□□□□ -2.14
CDH13P55290 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
CDH13P55290 RNA5SP475-201ENST00000410568 110 ntBASIC1.69□□□□□ -2.14
CDH13P55290 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH13P55290 AL163195.1-201ENST00000496941 348 ntBASIC1.69□□□□□ -2.14
CDH13P55290 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
CDH13P55290 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH13P55290 RNU7-99P-201ENST00000516271 62 ntBASIC1.69□□□□□ -2.14
CDH13P55290 VN1R91P-201ENST00000594377 169 ntBASIC1.69□□□□□ -2.14
CDH13P55290 MIR8074-201ENST00000615081 81 ntBASIC1.69□□□□□ -2.14
CDH13P55290 RNU6-414P-201ENST00000363705 104 ntBASIC1.68□□□□□ -2.14
CDH13P55290 RNU1-115P-201ENST00000365329 160 ntBASIC1.68□□□□□ -2.14
CDH13P55290 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH13P55290 MIR628-201ENST00000385229 95 ntBASIC1.68□□□□□ -2.14
CDH13P55290 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CDH13P55290 SNORD78.2-201ENST00000391076 69 ntBASIC1.68□□□□□ -2.14
CDH13P55290 MTCO3P19-201ENST00000415864 321 ntBASIC1.68□□□□□ -2.14
CDH13P55290 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH13P55290 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH13P55290 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH13P55290 FCF1P4-201ENST00000448326 183 ntBASIC1.68□□□□□ -2.14
CDH13P55290 RNU7-169P-201ENST00000459456 61 ntBASIC1.68□□□□□ -2.14
CDH13P55290 RPL26P26-201ENST00000480251 434 ntBASIC1.68□□□□□ -2.14
CDH13P55290 Y_RNA.675-201ENST00000516389 149 ntBASIC1.68□□□□□ -2.14
CDH13P55290 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH13P55290 AC005828.6-201ENST00000606610 232 ntBASIC1.68□□□□□ -2.14
CDH13P55290 AL138825.1-201ENST00000618587 192 ntBASIC1.68□□□□□ -2.14
CDH13P55290 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH13P55290 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CDH13P55290 SNORD114-7-201ENST00000362520 77 ntBASIC1.67□□□□□ -2.14
CDH13P55290 Y_RNA.27-201ENST00000362540 103 ntBASIC1.67□□□□□ -2.14
CDH13P55290 Y_RNA.431-201ENST00000384086 102 ntBASIC1.67□□□□□ -2.14
CDH13P55290 RNU11-5P-201ENST00000391216 129 ntBASIC1.67□□□□□ -2.14
CDH13P55290 MRPL35P1-201ENST00000404272 572 ntBASIC1.67□□□□□ -2.14
CDH13P55290 MIR1261-201ENST00000408659 82 ntBASIC1.67□□□□□ -2.14
CDH13P55290 MRPS10P1-201ENST00000448483 130 ntBASIC1.67□□□□□ -2.14
CDH13P55290 HMGN2P23-201ENST00000456759 269 ntBASIC1.67□□□□□ -2.14
CDH13P55290 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CDH13P55290 RNA5SP182-201ENST00000516064 82 ntBASIC1.67□□□□□ -2.14
CDH13P55290 RNU6-1012P-201ENST00000516606 109 ntBASIC1.67□□□□□ -2.14
CDH13P55290 RNU7-128P-201ENST00000517247 62 ntBASIC1.67□□□□□ -2.14
CDH13P55290 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.67□□□□□ -2.14
CDH13P55290 MIR4438-201ENST00000585271 93 ntBASIC1.67□□□□□ -2.14
CDH13P55290 AL133255.1-201ENST00000606374 441 ntBASIC1.67□□□□□ -2.14
CDH13P55290 RNU6-271P-201ENST00000363858 105 ntBASIC1.66□□□□□ -2.14
CDH13P55290 SNORA20B-201ENST00000384220 132 ntBASIC1.66□□□□□ -2.14
CDH13P55290 RNU6-950P-201ENST00000384651 107 ntBASIC1.66□□□□□ -2.14
CDH13P55290 AL355796.1-201ENST00000406706 323 ntBASIC1.66□□□□□ -2.14
CDH13P55290 JTBP1-201ENST00000441314 247 ntBASIC1.66□□□□□ -2.14
CDH13P55290 AC073910.1-201ENST00000445047 438 ntBASIC1.66□□□□□ -2.14
CDH13P55290 snoU13.27-201ENST00000459278 104 ntBASIC1.66□□□□□ -2.14
CDH13P55290 snoU13.15-201ENST00000459407 104 ntBASIC1.66□□□□□ -2.14
CDH13P55290 RNU7-94P-201ENST00000459576 63 ntBASIC1.66□□□□□ -2.14
CDH13P55290 UBL5P3-201ENST00000475112 231 ntBASIC1.66□□□□□ -2.14
CDH13P55290 RPS27P22-201ENST00000478056 241 ntBASIC1.66□□□□□ -2.14
CDH13P55290 AC010469.2-201ENST00000496412 480 ntBASIC1.66□□□□□ -2.14
CDH13P55290 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.66□□□□□ -2.14
CDH13P55290 AP002001.1-203ENST00000534002 267 ntBASIC1.66□□□□□ -2.14
CDH13P55290 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.66□□□□□ -2.14
CDH13P55290 MIR4272-201ENST00000635924 64 ntBASIC1.66□□□□□ -2.14
CDH13P55290 U6.115-201ENST00000636045 103 ntBASIC1.66□□□□□ -2.14
CDH13P55290 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CDH13P55290 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDH13P55290 Y_RNA.5-201ENST00000362334 102 ntBASIC1.65□□□□□ -2.15
CDH13P55290 Y_RNA.39-201ENST00000362620 98 ntBASIC1.65□□□□□ -2.15
CDH13P55290 Y_RNA.197-201ENST00000364004 102 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNY3P11-201ENST00000364153 102 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNU6-454P-201ENST00000364292 107 ntBASIC1.65□□□□□ -2.15
CDH13P55290 Y_RNA.243-201ENST00000364481 109 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNU6-867P-201ENST00000364956 107 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNU6-439P-201ENST00000384188 106 ntBASIC1.65□□□□□ -2.15
CDH13P55290 MIR934-201ENST00000401241 83 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNU6-1186P-201ENST00000410429 97 ntBASIC1.65□□□□□ -2.15
CDH13P55290 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.65□□□□□ -2.15
CDH13P55290 AL121890.1-201ENST00000435457 205 ntBASIC1.65□□□□□ -2.15
CDH13P55290 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNU6-408P-201ENST00000515910 100 ntBASIC1.65□□□□□ -2.15
CDH13P55290 RNU6-1170P-201ENST00000515974 106 ntBASIC1.65□□□□□ -2.15
CDH13P55290 AC006600.1-201ENST00000572529 153 ntBASIC1.65□□□□□ -2.15
CDH13P55290 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CDH13P55290 SNORA27.1-201ENST00000362604 124 ntBASIC1.64□□□□□ -2.15
CDH13P55290 RNU5E-4P-201ENST00000364931 120 ntBASIC1.64□□□□□ -2.15
CDH13P55290 Y_RNA.496-201ENST00000384444 101 ntBASIC1.64□□□□□ -2.15
CDH13P55290 Y_RNA.579-201ENST00000390939 94 ntBASIC1.64□□□□□ -2.15
CDH13P55290 COX6CP10-201ENST00000416832 224 ntBASIC1.64□□□□□ -2.15
CDH13P55290 AC018865.2-201ENST00000423631 129 ntBASIC1.64□□□□□ -2.15
CDH13P55290 AC010154.1-201ENST00000425857 269 ntBASIC1.64□□□□□ -2.15
CDH13P55290 CHEK2P4-201ENST00000450340 246 ntBASIC1.64□□□□□ -2.15
CDH13P55290 RPS27P1-201ENST00000450552 247 ntBASIC1.64□□□□□ -2.15
CDH13P55290 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.64□□□□□ -2.15
CDH13P55290 AC027575.1-201ENST00000481064 460 ntBASIC1.64□□□□□ -2.15
CDH13P55290 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.64□□□□□ -2.15
CDH13P55290 MIR4298-201ENST00000584380 73 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms