Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR548S-201ENST00000581352 82 ntBASIC1.73□□□□□ -2.13
LIMK1P53667 MIR4452-201ENST00000583004 71 ntBASIC1.73□□□□□ -2.13
LIMK1P53667 AC025253.1-201ENST00000613623 543 ntBASIC1.73□□□□□ -2.13
LIMK1P53667 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
LIMK1P53667 MIR625-201ENST00000385047 85 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LIMK1P53667 MTCYBP4-201ENST00000401524 249 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 RNU6-1001P-201ENST00000411265 100 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 RPS20P15-201ENST00000412792 311 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 EIF1P2-201ENST00000428233 350 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 NDUFB4P10-201ENST00000452541 359 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.72□□□□□ -2.13
LIMK1P53667 RNU6-120P-201ENST00000516077 103 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 RNA5SP220-201ENST00000516298 104 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 CYCSP23-201ENST00000519781 313 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 RMST_2.1-201ENST00000617263 136 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 MTND4LP32-201ENST00000636111 270 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 MIR1302-1-201ENST00000637932 143 ntBASIC1.72□□□□□ -2.13
LIMK1P53667 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
LIMK1P53667 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.13
LIMK1P53667 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
LIMK1P53667 RNU6-874P-201ENST00000362390 105 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 Y_RNA.356-201ENST00000365475 113 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 Y_RNA.474-201ENST00000384341 102 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 Y_RNA.498-201ENST00000384460 102 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 SNORA75.6-201ENST00000391318 127 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 AL117342.1-201ENST00000404861 406 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 RNU6-1156P-201ENST00000410365 100 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMK1P53667 AC069257.2-201ENST00000441819 155 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.71□□□□□ -2.14
LIMK1P53667 AC091144.1-201ENST00000519573 138 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
LIMK1P53667 AC104260.1-201ENST00000616660 539 ntBASIC1.71□□□□□ -2.14
LIMK1P53667 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LIMK1P53667 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.7□□□□□ -2.14
LIMK1P53667 Y_RNA.67-201ENST00000362870 100 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 Y_RNA.303-201ENST00000364998 94 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 SNORA72.2-201ENST00000365028 127 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 RNU6-890P-201ENST00000384121 107 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 Y_RNA.577-201ENST00000384794 101 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 MIR515-2-201ENST00000384883 83 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 MIR515-1-201ENST00000384884 83 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 MIR329-1-201ENST00000385028 80 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 SNORA69.1-201ENST00000390904 137 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 RNU6-1009P-201ENST00000390996 107 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 RNA5SP467-201ENST00000391274 118 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 Y_RNA.605-201ENST00000410577 105 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 PCNPP5-201ENST00000452246 481 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 RNU1-123P-201ENST00000458950 160 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 AC091951.2-201ENST00000500762 203 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.7□□□□□ -2.14
LIMK1P53667 RNU1-142P-201ENST00000516682 145 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 AC027419.1-201ENST00000522976 328 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 AK6P2-201ENST00000549020 471 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 MIR4422-201ENST00000581938 83 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 AL353149.1-201ENST00000610667 244 ntBASIC1.7□□□□□ -2.14
LIMK1P53667 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
LIMK1P53667 RNU6-439P-201ENST00000384188 106 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 RNU6-296P-201ENST00000384608 107 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 RNU6-1186P-201ENST00000410429 97 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.69□□□□□ -2.14
LIMK1P53667 HSPE1P9-201ENST00000440046 311 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 MTND5P20-201ENST00000448677 143 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 MTCO3P10-201ENST00000455912 772 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 U8.22-201ENST00000459141 133 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 RNU7-169P-201ENST00000459456 61 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 RNU6-470P-201ENST00000515954 104 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 AC144568.1-201ENST00000520139 137 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.69□□□□□ -2.14
LIMK1P53667 AC084781.2-201ENST00000615568 161 ntBASIC1.69□□□□□ -2.14
LIMK1P53667 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
LIMK1P53667 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
LIMK1P53667 RNA5SP361-201ENST00000362686 118 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 Y_RNA.287-201ENST00000364853 94 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 Y_RNA.314-201ENST00000365114 102 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 RNU6-997P-201ENST00000384725 107 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 AC016909.1-201ENST00000415916 166 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 MTCO2P27-201ENST00000420740 428 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.68□□□□□ -2.14
LIMK1P53667 AC245047.4-201ENST00000433189 144 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 AC073910.1-201ENST00000445047 438 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 AL117351.2-201ENST00000513571 157 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 RNU6-875P-201ENST00000516488 106 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 RNA5SP481-201ENST00000516814 122 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 AL137100.2-201ENST00000555786 315 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 AC125232.2-201ENST00000592457 143 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 AL078603.1-201ENST00000603824 313 ntBASIC1.68□□□□□ -2.14
LIMK1P53667 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.68□□□□□ -2.14
LIMK1P53667 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LIMK1P53667 SNORD114-26-201ENST00000363543 72 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 RNY1-201ENST00000364228 113 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 RNU6-1145P-201ENST00000384246 107 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.67□□□□□ -2.14
LIMK1P53667 RNA5SP475-201ENST00000410568 110 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms