Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RNU6-1088P-201ENST00000516850 104 ntBASIC1.05□□□□□ -2.24
CASP4P49662 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.05□□□□□ -2.24
CASP4P49662 MIR5695-201ENST00000579717 85 ntBASIC1.05□□□□□ -2.24
CASP4P49662 AC100812.1-201ENST00000607622 580 ntBASIC1.05□□□□□ -2.24
CASP4P49662 AC073349.3-201ENST00000617616 186 ntBASIC1.05□□□□□ -2.24
CASP4P49662 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CASP4P49662 Y_RNA.295-201ENST00000364918 102 ntBASIC1.04□□□□□ -2.24
CASP4P49662 RNU6-1148P-201ENST00000410992 104 ntBASIC1.04□□□□□ -2.24
CASP4P49662 AL139396.1-201ENST00000421137 167 ntBASIC1.04□□□□□ -2.24
CASP4P49662 USP9YP16-201ENST00000430287 407 ntBASIC1.04□□□□□ -2.24
CASP4P49662 MTND3P23-201ENST00000431980 347 ntBASIC1.04□□□□□ -2.24
CASP4P49662 MRPS10P1-201ENST00000448483 130 ntBASIC1.04□□□□□ -2.24
CASP4P49662 USP9YP23-201ENST00000455085 407 ntBASIC1.04□□□□□ -2.24
CASP4P49662 Y_RNA.706-201ENST00000516933 99 ntBASIC1.04□□□□□ -2.24
CASP4P49662 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.04□□□□□ -2.24
CASP4P49662 MIR4781-201ENST00000585250 76 ntBASIC1.04□□□□□ -2.24
CASP4P49662 MIR4438-201ENST00000585271 93 ntBASIC1.04□□□□□ -2.24
CASP4P49662 SNORA28-201ENST00000606769 126 ntBASIC1.04□□□□□ -2.24
CASP4P49662 MIR3662-201ENST00000637030 95 ntBASIC1.04□□□□□ -2.24
CASP4P49662 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CASP4P49662 SNORA22-201ENST00000383907 134 ntBASIC1.03□□□□□ -2.24
CASP4P49662 RNU6-1080P-201ENST00000383982 107 ntBASIC1.03□□□□□ -2.24
CASP4P49662 SNORA22C-201ENST00000384614 134 ntBASIC1.03□□□□□ -2.24
CASP4P49662 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CASP4P49662 AL356776.1-201ENST00000406574 447 ntBASIC1.03□□□□□ -2.24
CASP4P49662 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.03□□□□□ -2.24
CASP4P49662 USP9YP30-201ENST00000430729 455 ntBASIC1.03□□□□□ -2.24
CASP4P49662 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.03□□□□□ -2.24
CASP4P49662 SNORD5.1-201ENST00000458800 75 ntBASIC1.03□□□□□ -2.24
CASP4P49662 SNORD65B-201ENST00000459126 73 ntBASIC1.03□□□□□ -2.24
CASP4P49662 RPS29P25-201ENST00000481709 171 ntBASIC1.03□□□□□ -2.24
CASP4P49662 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
CASP4P49662 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.03□□□□□ -2.24
CASP4P49662 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
CASP4P49662 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.03□□□□□ -2.24
CASP4P49662 AC091144.1-201ENST00000519573 138 ntBASIC1.03□□□□□ -2.24
CASP4P49662 CBX3P8-201ENST00000532412 525 ntBASIC1.03□□□□□ -2.24
CASP4P49662 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.03□□□□□ -2.24
CASP4P49662 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
CASP4P49662 AL021879.1-201ENST00000611756 288 ntBASIC1.03□□□□□ -2.24
CASP4P49662 MIR6128-201ENST00000615528 109 ntBASIC1.03□□□□□ -2.24
CASP4P49662 SNORD3E-202ENST00000627253 216 ntBASIC1.03□□□□□ -2.24
CASP4P49662 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
CASP4P49662 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CASP4P49662 Y_RNA.3-201ENST00000362331 103 ntBASIC1.02□□□□□ -2.25
CASP4P49662 Y_RNA.4-201ENST00000362333 112 ntBASIC1.02□□□□□ -2.25
CASP4P49662 RNY1P10-201ENST00000363268 113 ntBASIC1.02□□□□□ -2.25
CASP4P49662 RNU6-1059P-201ENST00000363752 98 ntBASIC1.02□□□□□ -2.25
CASP4P49662 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
CASP4P49662 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CASP4P49662 AC010598.1-201ENST00000510378 103 ntBASIC1.02□□□□□ -2.25
CASP4P49662 RNA5SP102-201ENST00000516865 106 ntBASIC1.02□□□□□ -2.25
CASP4P49662 CYCSP23-201ENST00000519781 313 ntBASIC1.02□□□□□ -2.25
CASP4P49662 AC018630.2-201ENST00000534866 2403 ntBASIC1.02□□□□□ -2.25
CASP4P49662 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
CASP4P49662 MIR3684-201ENST00000579779 74 ntBASIC1.02□□□□□ -2.25
CASP4P49662 AL513534.2-201ENST00000603836 250 ntBASIC1.02□□□□□ -2.25
CASP4P49662 AC093913.1-201ENST00000614178 329 ntBASIC1.02□□□□□ -2.25
CASP4P49662 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.02□□□□□ -2.25
CASP4P49662 AC068647.2-201ENST00000637380 353 ntBASIC1.02□□□□□ -2.25
CASP4P49662 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CASP4P49662 RNU6-281P-201ENST00000384212 103 ntBASIC1.01□□□□□ -2.25
CASP4P49662 RNU6-842P-201ENST00000384269 107 ntBASIC1.01□□□□□ -2.25
CASP4P49662 MIR562-201ENST00000384894 95 ntBASIC1.01□□□□□ -2.25
CASP4P49662 MIR660-201ENST00000385235 97 ntBASIC1.01□□□□□ -2.25
CASP4P49662 SNORA12.1-201ENST00000390873 148 ntBASIC1.01□□□□□ -2.25
CASP4P49662 MTCO3P19-201ENST00000415864 321 ntBASIC1.01□□□□□ -2.25
CASP4P49662 RPS27P22-201ENST00000478056 241 ntBASIC1.01□□□□□ -2.25
CASP4P49662 RNU6-107P-201ENST00000516643 102 ntBASIC1.01□□□□□ -2.25
CASP4P49662 RNA5SP404-201ENST00000517118 132 ntBASIC1.01□□□□□ -2.25
CASP4P49662 AC093023.1-201ENST00000547375 507 ntBASIC1.01□□□□□ -2.25
CASP4P49662 AL121579.1-201ENST00000555129 305 ntBASIC1.01□□□□□ -2.25
CASP4P49662 AC090617.3-201ENST00000573670 475 ntBASIC1.01□□□□□ -2.25
CASP4P49662 MIR4790-201ENST00000577799 79 ntBASIC1.01□□□□□ -2.25
CASP4P49662 BX284668.6-201ENST00000606899 438 ntBASIC1.01□□□□□ -2.25
CASP4P49662 MIR3688-2-201ENST00000636963 87 ntBASIC1.01□□□□□ -2.25
CASP4P49662 RNU6-222P-201ENST00000362438 107 ntBASIC1□□□□□ -2.25
CASP4P49662 Y_RNA.164-201ENST00000363709 102 ntBASIC1□□□□□ -2.25
CASP4P49662 RNU4-76P-201ENST00000364509 141 ntBASIC1□□□□□ -2.25
CASP4P49662 Y_RNA.301-201ENST00000364990 103 ntBASIC1□□□□□ -2.25
CASP4P49662 Y_RNA.453-201ENST00000384223 109 ntBASIC1□□□□□ -2.25
CASP4P49662 Y_RNA.516-201ENST00000384541 124 ntBASIC1□□□□□ -2.25
CASP4P49662 MIR222-201ENST00000384992 110 ntBASIC1□□□□□ -2.25
CASP4P49662 DYNLT3P2-201ENST00000442517 295 ntBASIC1□□□□□ -2.25
CASP4P49662 AC092991.1-201ENST00000477176 376 ntBASIC1□□□□□ -2.25
CASP4P49662 AC010469.2-201ENST00000496412 480 ntBASIC1□□□□□ -2.25
CASP4P49662 AC046134.1-201ENST00000514454 666 ntBASIC1□□□□□ -2.25
CASP4P49662 SNORD116-28-201ENST00000516123 91 ntBASIC1□□□□□ -2.25
CASP4P49662 MIR3973-201ENST00000579824 107 ntBASIC1□□□□□ -2.25
CASP4P49662 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
CASP4P49662 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
CASP4P49662 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
CASP4P49662 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1□□□□□ -2.25
CASP4P49662 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
CASP4P49662 Y_RNA.106-201ENST00000363189 100 ntBASIC0.99□□□□□ -2.25
CASP4P49662 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
CASP4P49662 RNU6-1264P-201ENST00000383891 107 ntBASIC0.99□□□□□ -2.25
CASP4P49662 RNU6-505P-201ENST00000384427 107 ntBASIC0.99□□□□□ -2.25
CASP4P49662 STAG3L5P-204ENST00000443759 179 ntBASIC0.99□□□□□ -2.25
CASP4P49662 AC097462.1-201ENST00000514125 324 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms