Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AC011195.1-201ENST00000578177 177 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AC100830.2-201ENST00000581636 240 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AL512605.2-201ENST00000592972 256 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AL121757.2-201ENST00000611223 313 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AL136317.1-201ENST00000612653 226 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AL354950.2-201ENST00000617939 290 ntBASIC0.21□□□□□ -2.38
RPL28P46779 AC007494.3-201ENST00000624660 743 ntBASIC0.21□□□□□ -2.38
RPL28P46779 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
RPL28P46779 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
RPL28P46779 Y_RNA.116-201ENST00000363292 103 ntBASIC0.2□□□□□ -2.38
RPL28P46779 Y_RNA.238-201ENST00000364441 102 ntBASIC0.2□□□□□ -2.38
RPL28P46779 Y_RNA.267-201ENST00000364679 109 ntBASIC0.2□□□□□ -2.38
RPL28P46779 RNU4-9P-201ENST00000364951 139 ntBASIC0.2□□□□□ -2.38
RPL28P46779 VTRNA1-3-201ENST00000365645 89 ntBASIC0.2□□□□□ -2.38
RPL28P46779 MT-TH-201ENST00000387441 69 ntBASIC0.2□□□□□ -2.38
RPL28P46779 RNU6-1158P-201ENST00000391167 107 ntBASIC0.2□□□□□ -2.38
RPL28P46779 MRPS10P2-201ENST00000431226 381 ntBASIC0.2□□□□□ -2.38
RPL28P46779 Z82188.1-201ENST00000436709 154 ntBASIC0.2□□□□□ -2.38
RPL28P46779 AC002350.1-201ENST00000490759 375 ntBASIC0.2□□□□□ -2.38
RPL28P46779 RNA5SP134-201ENST00000516492 96 ntBASIC0.2□□□□□ -2.38
RPL28P46779 MTCO2P4-201ENST00000517968 247 ntBASIC0.2□□□□□ -2.38
RPL28P46779 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.2□□□□□ -2.38
RPL28P46779 RPL21P9-201ENST00000556149 474 ntBASIC0.2□□□□□ -2.38
RPL28P46779 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.2□□□□□ -2.38
RPL28P46779 AC010620.1-201ENST00000601088 1102 ntBASIC0.2□□□□□ -2.38
RPL28P46779 AL133215.3-201ENST00000609801 448 ntBASIC0.2□□□□□ -2.38
RPL28P46779 AC109347.2-201ENST00000610220 349 ntBASIC0.2□□□□□ -2.38
RPL28P46779 AL158063.1-201ENST00000615349 536 ntBASIC0.2□□□□□ -2.38
RPL28P46779 AC068787.1-201ENST00000623908 691 ntBASIC0.2□□□□□ -2.38
RPL28P46779 AL008636.1-201ENST00000625038 1018 ntBASIC0.2□□□□□ -2.38
RPL28P46779 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
RPL28P46779 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
RPL28P46779 Y_RNA.122-201ENST00000363331 96 ntBASIC0.19□□□□□ -2.38
RPL28P46779 Y_RNA.378-201ENST00000365652 113 ntBASIC0.19□□□□□ -2.38
RPL28P46779 RNU6-214P-201ENST00000384130 107 ntBASIC0.19□□□□□ -2.38
RPL28P46779 RNU5A-6P-201ENST00000384136 116 ntBASIC0.19□□□□□ -2.38
RPL28P46779 RNU6-793P-201ENST00000384233 104 ntBASIC0.19□□□□□ -2.38
RPL28P46779 RNU6-933P-201ENST00000384424 107 ntBASIC0.19□□□□□ -2.38
RPL28P46779 RNY1P14-201ENST00000384426 108 ntBASIC0.19□□□□□ -2.38
RPL28P46779 MIR153-2-201ENST00000385225 87 ntBASIC0.19□□□□□ -2.38
RPL28P46779 MIR891A-201ENST00000401237 79 ntBASIC0.19□□□□□ -2.38
RPL28P46779 MTCO1P20-201ENST00000425366 358 ntBASIC0.19□□□□□ -2.38
RPL28P46779 Z98949.2-201ENST00000440996 144 ntBASIC0.19□□□□□ -2.38
RPL28P46779 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.19□□□□□ -2.38
RPL28P46779 AC107401.1-201ENST00000503426 685 ntBASIC0.19□□□□□ -2.38
RPL28P46779 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.19□□□□□ -2.38
RPL28P46779 SNORA19.2-201ENST00000516013 114 ntBASIC0.19□□□□□ -2.38
RPL28P46779 AC036111.3-201ENST00000526389 112 ntBASIC0.19□□□□□ -2.38
RPL28P46779 AC104383.1-201ENST00000530297 370 ntBASIC0.19□□□□□ -2.38
RPL28P46779 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.19□□□□□ -2.38
RPL28P46779 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
RPL28P46779 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
RPL28P46779 MIRLET7D-201ENST00000362263 87 ntBASIC0.18□□□□□ -2.38
RPL28P46779 Y_RNA.184-201ENST00000363884 108 ntBASIC0.18□□□□□ -2.38
RPL28P46779 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
RPL28P46779 RNU6-159P-201ENST00000391080 106 ntBASIC0.18□□□□□ -2.38
RPL28P46779 SNORA26.8-201ENST00000391306 124 ntBASIC0.18□□□□□ -2.38
RPL28P46779 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AL590002.1-201ENST00000406554 418 ntBASIC0.18□□□□□ -2.38
RPL28P46779 SNORD111-201ENST00000408139 94 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RNA5SP222-201ENST00000411039 105 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RNU5A-5P-201ENST00000411054 116 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AL365203.2-201ENST00000423444 196 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AC067940.1-201ENST00000458411 300 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RNU6-1132P-201ENST00000459214 107 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AC093303.1-201ENST00000514549 295 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RN7SKP164-201ENST00000516138 266 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RNU6-1038P-201ENST00000516516 104 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RNU6-405P-201ENST00000516637 110 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RNU6-1116P-201ENST00000517269 99 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AC091144.1-201ENST00000519573 138 ntBASIC0.18□□□□□ -2.38
RPL28P46779 MIR4711-201ENST00000578274 70 ntBASIC0.18□□□□□ -2.38
RPL28P46779 PIGPP4-201ENST00000584447 307 ntBASIC0.18□□□□□ -2.38
RPL28P46779 RNU6-94P-201ENST00000607728 107 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AL136370.1-201ENST00000608166 691 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AC006504.8-201ENST00000621046 635 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AC027279.3-201ENST00000625055 122 ntBASIC0.18□□□□□ -2.38
RPL28P46779 AL589743.1-201ENST00000551932 2712 ntBASIC0.18□□□□□ -2.38
RPL28P46779 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.17□□□□□ -2.38
RPL28P46779 SNORA25.3-201ENST00000363205 127 ntBASIC0.17□□□□□ -2.38
RPL28P46779 Y_RNA.167-201ENST00000363735 109 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNU5F-3P-201ENST00000363767 117 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNU6-280P-201ENST00000364145 104 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNU4-41P-201ENST00000364426 143 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNY1P8-201ENST00000383970 114 ntBASIC0.17□□□□□ -2.38
RPL28P46779 SNORA36.2-201ENST00000384004 127 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNU6-38P-201ENST00000384085 107 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNU6-1103P-201ENST00000384150 107 ntBASIC0.17□□□□□ -2.38
RPL28P46779 SNORA20B-201ENST00000384220 132 ntBASIC0.17□□□□□ -2.38
RPL28P46779 MIR1827-201ENST00000408549 66 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNU6-177P-201ENST00000411257 104 ntBASIC0.17□□□□□ -2.38
RPL28P46779 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.17□□□□□ -2.38
RPL28P46779 ZNF885P-201ENST00000420174 1098 ntBASIC0.17□□□□□ -2.38
RPL28P46779 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.17□□□□□ -2.38
RPL28P46779 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.17□□□□□ -2.38
RPL28P46779 Y_RNA.654-201ENST00000497848 106 ntBASIC0.17□□□□□ -2.38
RPL28P46779 CYCTP-201ENST00000504253 315 ntBASIC0.17□□□□□ -2.38
RPL28P46779 RNU6-1291P-201ENST00000516591 104 ntBASIC0.17□□□□□ -2.38
RPL28P46779 AF235103.2-201ENST00000525753 346 ntBASIC0.17□□□□□ -2.38
RPL28P46779 AL358944.1-201ENST00000528537 144 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms