Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN9P43378 AL118496.2-201ENST00000448300 230 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 RNU6-1146P-201ENST00000516282 102 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 RNU2-12P-201ENST00000517216 168 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.12□□□□□ -2.07
PTPN9P43378 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.12□□□□□ -2.07
PTPN9P43378 AC005786.1-201ENST00000588553 154 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 AC008737.2-201ENST00000599446 118 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 AC022441.3-201ENST00000605737 136 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 AC005828.6-201ENST00000606610 232 ntBASIC2.12□□□□□ -2.07
PTPN9P43378 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PTPN9P43378 AL159152.1-201ENST00000635019 2587 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RNU6-1266P-201ENST00000362794 105 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RNU6-23P-201ENST00000363283 107 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RNU6-454P-201ENST00000364292 107 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 Y_RNA.243-201ENST00000364481 109 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 SNORA72.2-201ENST00000365028 127 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 Y_RNA.361-201ENST00000365515 120 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 SNORD115-46-201ENST00000390982 71 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RPL21P1-201ENST00000399532 476 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 MIR1283-2-201ENST00000408621 87 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RNU2-2P-201ENST00000410396 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.11□□□□□ -2.07
PTPN9P43378 RNU6-717P-201ENST00000459076 104 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RN7SL429P-201ENST00000479090 223 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RN7SL489P-201ENST00000486185 223 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RN7SL327P-201ENST00000488659 223 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 MRPS35P2-201ENST00000508242 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RNU1-40P-201ENST00000516816 164 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RNU1-97P-201ENST00000516872 164 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 SNORA40.15-201ENST00000516884 107 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.11□□□□□ -2.07
PTPN9P43378 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.11□□□□□ -2.07
PTPN9P43378 AL117187.1-201ENST00000555482 181 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 AC002984.1-201ENST00000591692 448 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.15-201ENST00000611544 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.16-201ENST00000613119 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.12-201ENST00000613778 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.20-201ENST00000613956 192 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.9-201ENST00000615427 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 AC004467.1-201ENST00000615678 330 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.11-201ENST00000616345 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.2-201ENST00000616535 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 AL590240.4-201ENST00000616908 390 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RN7SL853P-201ENST00000617250 223 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.3-201ENST00000617785 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.19-201ENST00000618602 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 RNU2-1-201ENST00000618664 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.6-201ENST00000619225 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.5-201ENST00000619465 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 U2.10-201ENST00000620268 191 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 AC091932.3-201ENST00000624223 323 ntBASIC2.11□□□□□ -2.07
PTPN9P43378 CENPCP1-201ENST00000533085 2578 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN9P43378 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN9P43378 RNU6-770P-201ENST00000363929 105 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 Y_RNA.210-201ENST00000364161 110 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 Y_RNA.214-201ENST00000364201 112 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN9P43378 AC016909.1-201ENST00000415916 166 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AC060773.1-201ENST00000421698 310 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 MTND2P29-201ENST00000438595 412 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AL731563.1-201ENST00000442202 214 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 ATP5J2P3-201ENST00000451550 258 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AC010598.1-201ENST00000510378 103 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN9P43378 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.1□□□□□ -2.07
PTPN9P43378 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.1□□□□□ -2.07
PTPN9P43378 AC055872.1-201ENST00000570978 278 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 MIR4300-201ENST00000581016 96 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AC006380.1-201ENST00000603598 186 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AC011373.1-201ENST00000607270 237 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.1□□□□□ -2.07
PTPN9P43378 MIR376A1-201ENST00000616574 68 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PTPN9P43378 AL359851.1-201ENST00000569460 4997 ntBASIC2.1□□□□□ -2.07
PTPN9P43378 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PTPN9P43378 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PTPN9P43378 Y_RNA.143-201ENST00000363520 106 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 RNU6-1175P-201ENST00000365200 107 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 RNU6-1109P-201ENST00000391187 107 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 RPL23AP36-201ENST00000413895 458 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 ELOCP20-201ENST00000422460 345 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 BX510359.4-201ENST00000423750 193 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 AL358176.2-201ENST00000425769 204 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.09□□□□□ -2.07
PTPN9P43378 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.09□□□□□ -2.07
PTPN9P43378 AC005042.3-201ENST00000453230 174 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 AC011406.1-201ENST00000512440 370 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 RNU6-397P-201ENST00000516226 104 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 AC136932.1-201ENST00000574771 208 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 MIR3945-201ENST00000581853 98 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.09□□□□□ -2.07
PTPN9P43378 AC008749.1-201ENST00000597650 306 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.09□□□□□ -2.07
PTPN9P43378 Y_RNA.783-201ENST00000613546 102 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms