Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SNORD11B-201ENST00000607707 90 ntBASIC2.15□□□□□ -2.07
KRT9P35527 AL021879.1-201ENST00000611756 288 ntBASIC2.15□□□□□ -2.07
KRT9P35527 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.15□□□□□ -2.07
KRT9P35527 U2.1-201ENST00000618978 145 ntBASIC2.15□□□□□ -2.07
KRT9P35527 MIR4272-201ENST00000635924 64 ntBASIC2.15□□□□□ -2.07
KRT9P35527 ZNF72P-201ENST00000425869 1908 ntBASIC2.15□□□□□ -2.07
KRT9P35527 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRT9P35527 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
KRT9P35527 RNU1-62P-201ENST00000362599 164 ntBASIC2.14□□□□□ -2.07
KRT9P35527 RNU6-280P-201ENST00000364145 104 ntBASIC2.14□□□□□ -2.07
KRT9P35527 Y_RNA.210-201ENST00000364161 110 ntBASIC2.14□□□□□ -2.07
KRT9P35527 Y_RNA.526-201ENST00000384572 110 ntBASIC2.14□□□□□ -2.07
KRT9P35527 RNU6-907P-201ENST00000390924 102 ntBASIC2.14□□□□□ -2.07
KRT9P35527 RNU6-700P-201ENST00000391043 107 ntBASIC2.14□□□□□ -2.07
KRT9P35527 RNA5SP504-201ENST00000410676 117 ntBASIC2.14□□□□□ -2.07
KRT9P35527 RNA5SP100-201ENST00000410903 110 ntBASIC2.14□□□□□ -2.07
KRT9P35527 RNA5SP59-201ENST00000410922 110 ntBASIC2.14□□□□□ -2.07
KRT9P35527 AC009310.1-201ENST00000414414 451 ntBASIC2.14□□□□□ -2.07
KRT9P35527 AC007098.1-201ENST00000420122 367 ntBASIC2.14□□□□□ -2.07
KRT9P35527 AC060773.1-201ENST00000421698 310 ntBASIC2.14□□□□□ -2.07
KRT9P35527 USP9YP16-201ENST00000430287 407 ntBASIC2.14□□□□□ -2.07
KRT9P35527 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
KRT9P35527 USP9YP23-201ENST00000455085 407 ntBASIC2.14□□□□□ -2.07
KRT9P35527 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
KRT9P35527 AC010655.3-201ENST00000478818 450 ntBASIC2.14□□□□□ -2.07
KRT9P35527 AC093852.1-201ENST00000503587 266 ntBASIC2.14□□□□□ -2.07
KRT9P35527 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.14□□□□□ -2.07
KRT9P35527 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.14□□□□□ -2.07
KRT9P35527 AC040926.1-201ENST00000530195 238 ntBASIC2.14□□□□□ -2.07
KRT9P35527 SUB1P4-201ENST00000566062 339 ntBASIC2.14□□□□□ -2.07
KRT9P35527 MIR5094-201ENST00000578766 85 ntBASIC2.14□□□□□ -2.07
KRT9P35527 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
KRT9P35527 MIR5188-201ENST00000583467 113 ntBASIC2.14□□□□□ -2.07
KRT9P35527 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.14□□□□□ -2.07
KRT9P35527 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.14□□□□□ -2.07
KRT9P35527 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.14□□□□□ -2.07
KRT9P35527 Y_RNA.106-201ENST00000363189 100 ntBASIC2.13□□□□□ -2.07
KRT9P35527 RNY3P11-201ENST00000364153 102 ntBASIC2.13□□□□□ -2.07
KRT9P35527 RNU4-42P-201ENST00000364738 142 ntBASIC2.13□□□□□ -2.07
KRT9P35527 SNORA63.7-201ENST00000365579 123 ntBASIC2.13□□□□□ -2.07
KRT9P35527 Y_RNA.512-201ENST00000384518 102 ntBASIC2.13□□□□□ -2.07
KRT9P35527 RNU6-713P-201ENST00000384761 107 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR10B-201ENST00000385011 110 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
KRT9P35527 AL033519.2-201ENST00000403958 392 ntBASIC2.13□□□□□ -2.07
KRT9P35527 RNU6-847P-201ENST00000411115 108 ntBASIC2.13□□□□□ -2.07
KRT9P35527 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.13□□□□□ -2.07
KRT9P35527 AC092423.1-201ENST00000430165 186 ntBASIC2.13□□□□□ -2.07
KRT9P35527 DYNLT3P2-201ENST00000442517 295 ntBASIC2.13□□□□□ -2.07
KRT9P35527 RNU6-1041P-201ENST00000516254 102 ntBASIC2.13□□□□□ -2.07
KRT9P35527 Y_RNA.715-201ENST00000517082 110 ntBASIC2.13□□□□□ -2.07
KRT9P35527 AC004584.2-201ENST00000570407 410 ntBASIC2.13□□□□□ -2.07
KRT9P35527 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.13□□□□□ -2.07
KRT9P35527 AC006600.1-201ENST00000572529 153 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR5701-3-201ENST00000578890 82 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR4713-201ENST00000582691 75 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR5701-1-201ENST00000585138 82 ntBASIC2.13□□□□□ -2.07
KRT9P35527 VN1R91P-201ENST00000594377 169 ntBASIC2.13□□□□□ -2.07
KRT9P35527 RPS29P30-201ENST00000600975 111 ntBASIC2.13□□□□□ -2.07
KRT9P35527 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
KRT9P35527 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.13□□□□□ -2.07
KRT9P35527 MIR1244-1-201ENST00000612829 85 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR5701-2-201ENST00000615634 82 ntBASIC2.13□□□□□ -2.07
KRT9P35527 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.13□□□□□ -2.07
KRT9P35527 MIR1244-3-201ENST00000635744 85 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR1244-2-201ENST00000636449 85 ntBASIC2.13□□□□□ -2.07
KRT9P35527 MIR1244-4-202ENST00000636813 85 ntBASIC2.13□□□□□ -2.07
KRT9P35527 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.13□□□□□ -2.07
KRT9P35527 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
KRT9P35527 Y_RNA.551-201ENST00000384661 102 ntBASIC2.12□□□□□ -2.07
KRT9P35527 MIR628-201ENST00000385229 95 ntBASIC2.12□□□□□ -2.07
KRT9P35527 SNORA69.1-201ENST00000390904 137 ntBASIC2.12□□□□□ -2.07
KRT9P35527 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.12□□□□□ -2.07
KRT9P35527 RNA5SP489-201ENST00000410986 109 ntBASIC2.12□□□□□ -2.07
KRT9P35527 RN7SKP192-201ENST00000411291 327 ntBASIC2.12□□□□□ -2.07
KRT9P35527 MTCO3P19-201ENST00000415864 321 ntBASIC2.12□□□□□ -2.07
KRT9P35527 AC099677.2-201ENST00000436385 175 ntBASIC2.12□□□□□ -2.07
KRT9P35527 CHEK2P4-201ENST00000450340 246 ntBASIC2.12□□□□□ -2.07
KRT9P35527 PCNPP5-201ENST00000452246 481 ntBASIC2.12□□□□□ -2.07
KRT9P35527 RN7SL274P-201ENST00000492268 272 ntBASIC2.12□□□□□ -2.07
KRT9P35527 RNY3P15-201ENST00000516297 97 ntBASIC2.12□□□□□ -2.07
KRT9P35527 AC062037.2-201ENST00000610137 73 ntBASIC2.12□□□□□ -2.07
KRT9P35527 AC005296.1-201ENST00000616145 209 ntBASIC2.12□□□□□ -2.07
KRT9P35527 AC068205.3-201ENST00000636385 468 ntBASIC2.12□□□□□ -2.07
KRT9P35527 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.12□□□□□ -2.07
KRT9P35527 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KRT9P35527 RNU6-874P-201ENST00000362390 105 ntBASIC2.11□□□□□ -2.07
KRT9P35527 RNU6-222P-201ENST00000362438 107 ntBASIC2.11□□□□□ -2.07
KRT9P35527 RNU6-862P-201ENST00000362804 105 ntBASIC2.11□□□□□ -2.07
KRT9P35527 RNU5F-3P-201ENST00000363767 117 ntBASIC2.11□□□□□ -2.07
KRT9P35527 RNU4-50P-201ENST00000364361 141 ntBASIC2.11□□□□□ -2.07
KRT9P35527 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRT9P35527 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.11□□□□□ -2.07
KRT9P35527 AC073910.1-201ENST00000445047 438 ntBASIC2.11□□□□□ -2.07
KRT9P35527 RNU7-57P-201ENST00000459540 60 ntBASIC2.11□□□□□ -2.07
KRT9P35527 AC091179.3-201ENST00000474761 144 ntBASIC2.11□□□□□ -2.07
KRT9P35527 AC011406.1-201ENST00000512440 370 ntBASIC2.11□□□□□ -2.07
KRT9P35527 RNU6-237P-201ENST00000515985 71 ntBASIC2.11□□□□□ -2.07
KRT9P35527 AC091144.1-201ENST00000519573 138 ntBASIC2.11□□□□□ -2.07
KRT9P35527 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms