Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 COX6CP10-201ENST00000416832 224 ntBASIC1.21□□□□□ -2.22
RFC4P35249 AC009161.1-201ENST00000417306 376 ntBASIC1.21□□□□□ -2.22
RFC4P35249 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.21□□□□□ -2.22
RFC4P35249 TOMM22P2-201ENST00000430735 237 ntBASIC1.21□□□□□ -2.22
RFC4P35249 AL606517.2-201ENST00000442855 241 ntBASIC1.21□□□□□ -2.22
RFC4P35249 RNU6-221P-201ENST00000459541 99 ntBASIC1.21□□□□□ -2.22
RFC4P35249 AC091179.3-201ENST00000474761 144 ntBASIC1.21□□□□□ -2.22
RFC4P35249 HMGN1P12-201ENST00000499125 195 ntBASIC1.21□□□□□ -2.22
RFC4P35249 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
RFC4P35249 RNU6-718P-201ENST00000516166 105 ntBASIC1.21□□□□□ -2.22
RFC4P35249 RNU6-566P-201ENST00000516790 107 ntBASIC1.21□□□□□ -2.22
RFC4P35249 MIR6128-201ENST00000615528 109 ntBASIC1.21□□□□□ -2.22
RFC4P35249 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.21□□□□□ -2.22
RFC4P35249 AC099654.5-201ENST00000636479 350 ntBASIC1.21□□□□□ -2.22
RFC4P35249 MIR3688-2-201ENST00000636963 87 ntBASIC1.21□□□□□ -2.22
RFC4P35249 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
RFC4P35249 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RFC4P35249 AC018630.2-201ENST00000534866 2403 ntBASIC1.2□□□□□ -2.22
RFC4P35249 RNU6-1240P-201ENST00000365155 104 ntBASIC1.2□□□□□ -2.22
RFC4P35249 Y_RNA.405-201ENST00000383979 100 ntBASIC1.2□□□□□ -2.22
RFC4P35249 Y_RNA.451-201ENST00000384200 100 ntBASIC1.2□□□□□ -2.22
RFC4P35249 RNU6-17P-201ENST00000384245 107 ntBASIC1.2□□□□□ -2.22
RFC4P35249 RNU6-18P-201ENST00000384527 107 ntBASIC1.2□□□□□ -2.22
RFC4P35249 Y_RNA.524-201ENST00000384564 100 ntBASIC1.2□□□□□ -2.22
RFC4P35249 Y_RNA.561-201ENST00000384694 100 ntBASIC1.2□□□□□ -2.22
RFC4P35249 Y_RNA.573-201ENST00000384763 105 ntBASIC1.2□□□□□ -2.22
RFC4P35249 RNU6-159P-201ENST00000391080 106 ntBASIC1.2□□□□□ -2.22
RFC4P35249 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
RFC4P35249 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFC4P35249 AC243428.1-201ENST00000421099 264 ntBASIC1.2□□□□□ -2.22
RFC4P35249 AC010154.1-201ENST00000425857 269 ntBASIC1.2□□□□□ -2.22
RFC4P35249 AC005002.2-201ENST00000438228 269 ntBASIC1.2□□□□□ -2.22
RFC4P35249 AP000870.1-201ENST00000472927 406 ntBASIC1.2□□□□□ -2.22
RFC4P35249 RPS29P25-201ENST00000481709 171 ntBASIC1.2□□□□□ -2.22
RFC4P35249 RNU4-49P-201ENST00000516080 140 ntBASIC1.2□□□□□ -2.22
RFC4P35249 RNU6-1198P-201ENST00000516904 67 ntBASIC1.2□□□□□ -2.22
RFC4P35249 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.2□□□□□ -2.22
RFC4P35249 MIR4742-201ENST00000581069 85 ntBASIC1.2□□□□□ -2.22
RFC4P35249 AP003465.2-201ENST00000602571 373 ntBASIC1.2□□□□□ -2.22
RFC4P35249 AC093913.1-201ENST00000614178 329 ntBASIC1.2□□□□□ -2.22
RFC4P35249 Y_RNA.301-201ENST00000364990 103 ntBASIC1.19□□□□□ -2.22
RFC4P35249 RNU6-842P-201ENST00000384269 107 ntBASIC1.19□□□□□ -2.22
RFC4P35249 Y_RNA.473-201ENST00000384333 102 ntBASIC1.19□□□□□ -2.22
RFC4P35249 MIR194-1-201ENST00000384892 85 ntBASIC1.19□□□□□ -2.22
RFC4P35249 SNX2P2-201ENST00000424553 323 ntBASIC1.19□□□□□ -2.22
RFC4P35249 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.19□□□□□ -2.22
RFC4P35249 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.19□□□□□ -2.22
RFC4P35249 PGBD4P5-201ENST00000445958 426 ntBASIC1.19□□□□□ -2.22
RFC4P35249 RNU7-34P-201ENST00000459394 64 ntBASIC1.19□□□□□ -2.22
RFC4P35249 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.19□□□□□ -2.22
RFC4P35249 FRG2DP-202ENST00000566967 323 ntBASIC1.19□□□□□ -2.22
RFC4P35249 MIR4709-201ENST00000577272 72 ntBASIC1.19□□□□□ -2.22
RFC4P35249 MIR4698-201ENST00000577795 80 ntBASIC1.19□□□□□ -2.22
RFC4P35249 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
RFC4P35249 7SK.7-201ENST00000603504 247 ntBASIC1.19□□□□□ -2.22
RFC4P35249 MZT1P2-201ENST00000604387 248 ntBASIC1.19□□□□□ -2.22
RFC4P35249 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.19□□□□□ -2.22
RFC4P35249 U6.108-201ENST00000637764 58 ntBASIC1.19□□□□□ -2.22
RFC4P35249 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RFC4P35249 SNORA72.2-201ENST00000365028 127 ntBASIC1.18□□□□□ -2.22
RFC4P35249 MIR1185-2-201ENST00000408687 86 ntBASIC1.18□□□□□ -2.22
RFC4P35249 RNU6-1186P-201ENST00000410429 97 ntBASIC1.18□□□□□ -2.22
RFC4P35249 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.18□□□□□ -2.22
RFC4P35249 RNU7-175P-201ENST00000515915 61 ntBASIC1.18□□□□□ -2.22
RFC4P35249 Y_RNA.682-201ENST00000516457 100 ntBASIC1.18□□□□□ -2.22
RFC4P35249 RNU1-142P-201ENST00000516682 145 ntBASIC1.18□□□□□ -2.22
RFC4P35249 RNU1-54P-201ENST00000517181 120 ntBASIC1.18□□□□□ -2.22
RFC4P35249 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.18□□□□□ -2.22
RFC4P35249 AL442163.3-201ENST00000554110 156 ntBASIC1.18□□□□□ -2.22
RFC4P35249 CYP3A52P-201ENST00000563326 91 ntBASIC1.18□□□□□ -2.22
RFC4P35249 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.18□□□□□ -2.22
RFC4P35249 MIR5695-201ENST00000579717 85 ntBASIC1.18□□□□□ -2.22
RFC4P35249 AL929325.1-201ENST00000603096 117 ntBASIC1.18□□□□□ -2.22
RFC4P35249 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
RFC4P35249 AC090517.2-201ENST00000614966 680 ntBASIC1.18□□□□□ -2.22
RFC4P35249 U4.5-201ENST00000617137 123 ntBASIC1.18□□□□□ -2.22
RFC4P35249 RNU6-222P-201ENST00000362438 107 ntBASIC1.17□□□□□ -2.22
RFC4P35249 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
RFC4P35249 Y_RNA.157-201ENST00000363638 102 ntBASIC1.17□□□□□ -2.22
RFC4P35249 Y_RNA.179-201ENST00000363844 90 ntBASIC1.17□□□□□ -2.22
RFC4P35249 RNU6-1013P-201ENST00000384180 107 ntBASIC1.17□□□□□ -2.22
RFC4P35249 MIR10B-201ENST00000385011 110 ntBASIC1.17□□□□□ -2.22
RFC4P35249 MIR513A1-201ENST00000385138 129 ntBASIC1.17□□□□□ -2.22
RFC4P35249 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.17□□□□□ -2.22
RFC4P35249 AC008134.1-201ENST00000420943 193 ntBASIC1.17□□□□□ -2.22
RFC4P35249 MTND1P17-201ENST00000448961 204 ntBASIC1.17□□□□□ -2.22
RFC4P35249 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.17□□□□□ -2.22
RFC4P35249 AC027419.1-201ENST00000522976 328 ntBASIC1.17□□□□□ -2.22
RFC4P35249 AL590705.4-201ENST00000532209 134 ntBASIC1.17□□□□□ -2.22
RFC4P35249 AC015688.6-201ENST00000577737 104 ntBASIC1.17□□□□□ -2.22
RFC4P35249 MIR4790-201ENST00000577799 79 ntBASIC1.17□□□□□ -2.22
RFC4P35249 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.17□□□□□ -2.22
RFC4P35249 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
RFC4P35249 U3.8-201ENST00000363675 217 ntBASIC1.16□□□□□ -2.22
RFC4P35249 RNU6-595P-201ENST00000363944 107 ntBASIC1.16□□□□□ -2.22
RFC4P35249 RNU6-280P-201ENST00000364145 104 ntBASIC1.16□□□□□ -2.22
RFC4P35249 RNU4-41P-201ENST00000364426 143 ntBASIC1.16□□□□□ -2.22
RFC4P35249 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.16□□□□□ -2.22
RFC4P35249 RNU6-793P-201ENST00000384233 104 ntBASIC1.16□□□□□ -2.22
RFC4P35249 MIR515-2-201ENST00000384883 83 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms