Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL158209.2-201ENST00000619266 216 ntBASIC0.4□□□□□ -2.35
RPA3P35244 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC006504.8-201ENST00000621046 635 ntBASIC0.4□□□□□ -2.35
RPA3P35244 7SK.10-201ENST00000621414 298 ntBASIC0.4□□□□□ -2.35
RPA3P35244 AC244015.1-201ENST00000622301 99 ntBASIC0.4□□□□□ -2.35
RPA3P35244 RNA5SP264-201ENST00000363115 107 ntBASIC0.39□□□□□ -2.35
RPA3P35244 RNU1-139P-201ENST00000391307 165 ntBASIC0.39□□□□□ -2.35
RPA3P35244 MIR936-201ENST00000401264 98 ntBASIC0.39□□□□□ -2.35
RPA3P35244 AC092423.1-201ENST00000430165 186 ntBASIC0.39□□□□□ -2.35
RPA3P35244 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.39□□□□□ -2.35
RPA3P35244 U7.7-201ENST00000459276 60 ntBASIC0.39□□□□□ -2.35
RPA3P35244 RNU6-496P-201ENST00000516145 99 ntBASIC0.39□□□□□ -2.35
RPA3P35244 RNU6-1198P-201ENST00000516904 67 ntBASIC0.39□□□□□ -2.35
RPA3P35244 RNU6-1116P-201ENST00000517269 99 ntBASIC0.39□□□□□ -2.35
RPA3P35244 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.39□□□□□ -2.35
RPA3P35244 AC109810.1-201ENST00000534066 224 ntBASIC0.39□□□□□ -2.35
RPA3P35244 UBL5P4-201ENST00000562584 236 ntBASIC0.39□□□□□ -2.35
RPA3P35244 MTND1P15-201ENST00000579262 949 ntBASIC0.39□□□□□ -2.35
RPA3P35244 Y_RNA.169-201ENST00000363745 96 ntBASIC0.38□□□□□ -2.35
RPA3P35244 SNORD115-32-201ENST00000364079 82 ntBASIC0.38□□□□□ -2.35
RPA3P35244 RNU4-9P-201ENST00000364951 139 ntBASIC0.38□□□□□ -2.35
RPA3P35244 Y_RNA.355-201ENST00000365462 98 ntBASIC0.38□□□□□ -2.35
RPA3P35244 RNU4-20P-201ENST00000365601 151 ntBASIC0.38□□□□□ -2.35
RPA3P35244 RNU6-348P-201ENST00000384386 107 ntBASIC0.38□□□□□ -2.35
RPA3P35244 RPL23AP50-201ENST00000434149 455 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AP000870.1-201ENST00000472927 406 ntBASIC0.38□□□□□ -2.35
RPA3P35244 Y_RNA.654-201ENST00000497848 106 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AC010598.1-201ENST00000510378 103 ntBASIC0.38□□□□□ -2.35
RPA3P35244 RNU6-341P-201ENST00000516973 96 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AC091144.1-201ENST00000519573 138 ntBASIC0.38□□□□□ -2.35
RPA3P35244 MIR4528-201ENST00000577763 90 ntBASIC0.38□□□□□ -2.35
RPA3P35244 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AC100830.2-201ENST00000581636 240 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AC025627.3-201ENST00000582078 182 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AC091178.2-201ENST00000584401 117 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AC092807.2-201ENST00000609367 243 ntBASIC0.38□□□□□ -2.35
RPA3P35244 AC006435.5-201ENST00000624486 112 ntBASIC0.38□□□□□ -2.35
RPA3P35244 Y_RNA.184-201ENST00000363884 108 ntBASIC0.37□□□□□ -2.35
RPA3P35244 RNU6-1103P-201ENST00000384150 107 ntBASIC0.37□□□□□ -2.35
RPA3P35244 RNU6-793P-201ENST00000384233 104 ntBASIC0.37□□□□□ -2.35
RPA3P35244 Y_RNA.508-201ENST00000384502 114 ntBASIC0.37□□□□□ -2.35
RPA3P35244 MIR153-2-201ENST00000385225 87 ntBASIC0.37□□□□□ -2.35
RPA3P35244 MTCO3P19-201ENST00000415864 321 ntBASIC0.37□□□□□ -2.35
RPA3P35244 RPL30P16-201ENST00000419341 429 ntBASIC0.37□□□□□ -2.35
RPA3P35244 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.37□□□□□ -2.35
RPA3P35244 AL353572.1-201ENST00000442490 417 ntBASIC0.37□□□□□ -2.35
RPA3P35244 RNU7-187P-201ENST00000458985 68 ntBASIC0.37□□□□□ -2.35
RPA3P35244 HMGN2P26-201ENST00000463169 339 ntBASIC0.37□□□□□ -2.35
RPA3P35244 SNORA40.12-201ENST00000516329 111 ntBASIC0.37□□□□□ -2.35
RPA3P35244 RNU6-1291P-201ENST00000516591 104 ntBASIC0.37□□□□□ -2.35
RPA3P35244 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.37□□□□□ -2.35
RPA3P35244 RPL21P9-201ENST00000556149 474 ntBASIC0.37□□□□□ -2.35
RPA3P35244 AC093424.1-201ENST00000604999 338 ntBASIC0.37□□□□□ -2.35
RPA3P35244 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
RPA3P35244 AC093913.1-201ENST00000614178 329 ntBASIC0.37□□□□□ -2.35
RPA3P35244 FAM157A-202ENST00000615155 405 ntBASIC0.37□□□□□ -2.35
RPA3P35244 AC007014.2-201ENST00000615581 479 ntBASIC0.37□□□□□ -2.35
RPA3P35244 AC009248.2-201ENST00000619826 254 ntBASIC0.37□□□□□ -2.35
RPA3P35244 MIR103A2-201ENST00000362154 78 ntBASIC0.36□□□□□ -2.35
RPA3P35244 SNORA25.3-201ENST00000363205 127 ntBASIC0.36□□□□□ -2.35
RPA3P35244 Y_RNA.167-201ENST00000363735 109 ntBASIC0.36□□□□□ -2.35
RPA3P35244 SNORD113-7-201ENST00000363762 77 ntBASIC0.36□□□□□ -2.35
RPA3P35244 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
RPA3P35244 RNU6-541P-201ENST00000384709 110 ntBASIC0.36□□□□□ -2.35
RPA3P35244 RNA5SP482-201ENST00000391269 118 ntBASIC0.36□□□□□ -2.35
RPA3P35244 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.36□□□□□ -2.35
RPA3P35244 RNU6-1208P-201ENST00000459588 107 ntBASIC0.36□□□□□ -2.35
RPA3P35244 RNU6-415P-201ENST00000516252 97 ntBASIC0.36□□□□□ -2.35
RPA3P35244 RN7SKP287-201ENST00000516546 266 ntBASIC0.36□□□□□ -2.35
RPA3P35244 AC104383.1-201ENST00000530297 370 ntBASIC0.36□□□□□ -2.35
RPA3P35244 AP002004.2-201ENST00000531656 154 ntBASIC0.36□□□□□ -2.35
RPA3P35244 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.36□□□□□ -2.35
RPA3P35244 7SK.7-201ENST00000603504 247 ntBASIC0.36□□□□□ -2.35
RPA3P35244 AC007684.1-201ENST00000609671 477 ntBASIC0.36□□□□□ -2.35
RPA3P35244 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
RPA3P35244 SEPT14P17-201ENST00000617978 177 ntBASIC0.36□□□□□ -2.35
RPA3P35244 AL603755.1-201ENST00000619504 163 ntBASIC0.36□□□□□ -2.35
RPA3P35244 AC073534.2-201ENST00000620377 381 ntBASIC0.36□□□□□ -2.35
RPA3P35244 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.36□□□□□ -2.35
RPA3P35244 RNU6-790P-201ENST00000384479 105 ntBASIC0.35□□□□□ -2.35
RPA3P35244 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
RPA3P35244 RNU6-159P-201ENST00000391080 106 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
RPA3P35244 Z98949.2-201ENST00000440996 144 ntBASIC0.35□□□□□ -2.35
RPA3P35244 DAP3P1-201ENST00000441522 278 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AC026371.1-201ENST00000551867 419 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AC011195.1-201ENST00000578177 177 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AC010620.1-201ENST00000601088 1102 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AL158063.1-201ENST00000615349 536 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
RPA3P35244 AL008636.1-201ENST00000625038 1018 ntBASIC0.35□□□□□ -2.35
RPA3P35244 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
RPA3P35244 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
RPA3P35244 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
RPA3P35244 Y_RNA.151-201ENST00000363566 112 ntBASIC0.34□□□□□ -2.36
RPA3P35244 Y_RNA.179-201ENST00000363844 90 ntBASIC0.34□□□□□ -2.36
RPA3P35244 Y_RNA.796-201ENST00000364268 102 ntBASIC0.34□□□□□ -2.36
RPA3P35244 Y_RNA.799-201ENST00000364992 102 ntBASIC0.34□□□□□ -2.36
RPA3P35244 Y_RNA.336-201ENST00000365307 109 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms