Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC009310.1-201ENST00000414414 451 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 EBAG9P1-201ENST00000418955 543 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 DPH3P2-201ENST00000422618 250 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 AC245047.4-201ENST00000433189 144 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 RPS26P55-201ENST00000471178 356 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF4P23510 SEPT14P8-201ENST00000508026 178 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF4P23510 RNU6-1046P-201ENST00000516538 107 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.19□□□□□ -2.06
TNFSF4P23510 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFSF4P23510 AC136932.1-201ENST00000574771 208 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 MIR5694-201ENST00000581190 76 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 SNORD113-5-201ENST00000607261 78 ntBASIC2.19□□□□□ -2.06
TNFSF4P23510 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFSF4P23510 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TNFSF4P23510 SNORA33-201ENST00000363664 130 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 RNA5SP210-201ENST00000391034 120 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFSF4P23510 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFSF4P23510 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF4P23510 RPS26P45-201ENST00000471748 340 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 RPS27P21-201ENST00000486977 252 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 SNORA31.11-201ENST00000516528 139 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 IGLV3-17-201ENST00000519099 244 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF4P23510 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFSF4P23510 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.18□□□□□ -2.06
TNFSF4P23510 MIR4299-201ENST00000577899 72 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 MIR4300-201ENST00000581016 96 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 MIR3162-201ENST00000581818 82 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 U4.3-201ENST00000621047 82 ntBASIC2.18□□□□□ -2.06
TNFSF4P23510 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
TNFSF4P23510 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TNFSF4P23510 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFSF4P23510 MIR6073-201ENST00000352083 89 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 RNU1-22P-201ENST00000363334 158 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 Y_RNA.145-201ENST00000363527 102 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 RNU6-770P-201ENST00000363929 105 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 MIR27B-201ENST00000385129 97 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 SNORD115-46-201ENST00000390982 71 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 AC113618.1-201ENST00000416747 285 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFSF4P23510 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 AC010655.3-201ENST00000478818 450 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 MRPS35P2-201ENST00000508242 191 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 RNU6-1278P-201ENST00000516130 107 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 RNU6-436P-201ENST00000516171 114 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 RNU7-172P-201ENST00000517125 64 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 Y_RNA.720-201ENST00000517166 92 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.17□□□□□ -2.06
TNFSF4P23510 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFSF4P23510 AC010900.2-201ENST00000604508 210 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 MIR6817-201ENST00000615588 66 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 AC007742.2-201ENST00000618226 398 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 U6.108-201ENST00000637764 58 ntBASIC2.17□□□□□ -2.06
TNFSF4P23510 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TNFSF4P23510 SNORA63D-201ENST00000364359 132 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 RNA5SP181-201ENST00000410246 98 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 RNU6-710P-201ENST00000410424 105 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 RNU2-7P-201ENST00000410794 178 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.16□□□□□ -2.06
TNFSF4P23510 HSPE1P13-201ENST00000451143 297 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFSF4P23510 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFSF4P23510 AL163195.1-201ENST00000496941 348 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 RNA5SP24-201ENST00000516478 95 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 RNU7-128P-201ENST00000517247 62 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 RPL21P9-201ENST00000556149 474 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFSF4P23510 AL627230.6-201ENST00000611129 280 ntBASIC2.16□□□□□ -2.06
TNFSF4P23510 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
TNFSF4P23510 Y_RNA.124-201ENST00000363339 93 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNA5SP68-201ENST00000363885 119 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 Y_RNA.214-201ENST00000364201 112 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 SNORA63C-201ENST00000364578 129 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNU6-505P-201ENST00000384427 107 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNU6-738P-201ENST00000384531 106 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNU6-296P-201ENST00000384608 107 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TNFSF4P23510 RNU4-30P-201ENST00000410245 143 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 ELOCP20-201ENST00000422460 345 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 AC024067.1-201ENST00000426199 223 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 AC010409.1-201ENST00000487382 476 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RPS29P21-201ENST00000496272 170 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 HMGB3P17-201ENST00000504195 649 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 AC025465.3-201ENST00000510570 311 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNY3P15-201ENST00000516297 97 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNU6-966P-201ENST00000516479 104 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNA5SP481-201ENST00000516814 122 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 RNA5SP402-201ENST00000517148 110 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF4P23510 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF4P23510 MIR4713-201ENST00000582691 75 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 AC116312.1-201ENST00000606841 314 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF4P23510 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.15□□□□□ -2.07
TNFSF4P23510 AC127459.3-201ENST00000624328 466 ntBASIC2.15□□□□□ -2.07
TNFSF4P23510 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms