Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.11□□□□□ -2.23
COL5A1P20908 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.11□□□□□ -2.23
COL5A1P20908 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.11□□□□□ -2.23
COL5A1P20908 RPL30P10-201ENST00000488148 337 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 HMGB1P35-201ENST00000503360 598 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 RNU6-327P-201ENST00000516270 127 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 RNU6-1045P-201ENST00000516321 107 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 RNU6-1137P-201ENST00000517073 99 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 AC115990.1-201ENST00000526957 301 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 AK6P2-201ENST00000549020 471 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 AL442163.3-201ENST00000554110 156 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 VN1R91P-201ENST00000594377 169 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 AC078899.2-201ENST00000595282 212 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 Y_RNA.812-201ENST00000610788 101 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 Y_RNA.784-201ENST00000613803 101 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 Y_RNA.787-201ENST00000616522 101 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 Y_RNA.780-201ENST00000617336 101 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 Y_RNA.801-201ENST00000619005 101 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 AC010329.5-201ENST00000623497 2174 ntBASIC1.11□□□□□ -2.23
COL5A1P20908 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
COL5A1P20908 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
COL5A1P20908 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL5A1P20908 Y_RNA.133-201ENST00000363428 110 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 MTCO2P12-201ENST00000427426 682 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AL161651.1-201ENST00000440882 223 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.1□□□□□ -2.23
COL5A1P20908 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.1□□□□□ -2.23
COL5A1P20908 RNU7-169P-201ENST00000459456 61 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.1□□□□□ -2.23
COL5A1P20908 RNU6-976P-201ENST00000516086 111 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 MIR4714-201ENST00000580728 77 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 MZT1P2-201ENST00000604387 248 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AC005014.2-201ENST00000607795 599 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.1□□□□□ -2.23
COL5A1P20908 AL078596.1-201ENST00000624856 447 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 SNORA43.4-201ENST00000629559 138 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL5A1P20908 RNU1-62P-201ENST00000362599 164 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 RNU6-873P-201ENST00000363833 107 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 SNORA16B-201ENST00000364674 135 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 RNU1-115P-201ENST00000365329 160 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 Y_RNA.424-201ENST00000384063 103 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 Y_RNA.504-201ENST00000384481 104 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 MIR32-201ENST00000384965 70 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 RNU6-985P-201ENST00000410182 104 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 Y_RNA.597-201ENST00000410463 100 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.1□□□□□ -2.23
COL5A1P20908 RPL39P29-201ENST00000447779 157 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.1□□□□□ -2.23
COL5A1P20908 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.1□□□□□ -2.23
COL5A1P20908 RNU2-53P-201ENST00000516257 147 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL5A1P20908 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.1□□□□□ -2.23
COL5A1P20908 AC008737.2-201ENST00000599446 118 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AL078605.1-201ENST00000603529 500 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 SNRPGP20-201ENST00000604477 205 ntBASIC1.1□□□□□ -2.23
COL5A1P20908 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.1□□□□□ -2.23
COL5A1P20908 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL5A1P20908 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.1□□□□□ -2.23
COL5A1P20908 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.28-201ENST00000362554 111 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.39-201ENST00000362620 98 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 RNU6-1301P-201ENST00000362724 104 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.162-201ENST00000363683 102 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.216-201ENST00000364205 93 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 SNORA63.7-201ENST00000365579 123 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 RNU6-26P-201ENST00000383985 107 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.458-201ENST00000384240 102 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 RNU1-148P-201ENST00000384472 162 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 RNU6-1011P-201ENST00000384668 107 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 EIF1P2-201ENST00000428233 350 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 USP9YP16-201ENST00000430287 407 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.09□□□□□ -2.23
COL5A1P20908 PCNPP5-201ENST00000452246 481 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 USP9YP23-201ENST00000455085 407 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 U8.20-201ENST00000459445 131 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AP001324.2-201ENST00000461163 319 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 RPS23P5-201ENST00000495419 428 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.661-201ENST00000516003 99 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.681-201ENST00000516445 113 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.711-201ENST00000516993 102 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Y_RNA.715-201ENST00000517082 110 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 MIR5006-201ENST00000583027 110 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AC092447.9-201ENST00000603395 144 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 Z98751.3-201ENST00000604447 521 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AL627230.6-201ENST00000611129 280 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AC040896.1-201ENST00000613819 479 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 MIR5739-201ENST00000619803 80 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AC090574.1-201ENST00000623186 233 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AC091932.3-201ENST00000624223 323 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 AC099654.10-201ENST00000640395 161 ntBASIC1.09□□□□□ -2.23
COL5A1P20908 MTND5P16-201ENST00000460269 1703 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 ZNF204P-201ENST00000416749 2397 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 Y_RNA.48-201ENST00000362710 103 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 Y_RNA.115-201ENST00000363272 98 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 Y_RNA.158-201ENST00000363651 101 ntBASIC1.08□□□□□ -2.24
COL5A1P20908 RNU5F-3P-201ENST00000363767 117 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms