Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU7-4P-201ENST00000516961 62 ntBASIC1.79□□□□□ -2.12
CAPN3P20807 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.79□□□□□ -2.12
CAPN3P20807 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.79□□□□□ -2.12
CAPN3P20807 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.79□□□□□ -2.12
CAPN3P20807 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.79□□□□□ -2.12
CAPN3P20807 MIR4438-201ENST00000585271 93 ntBASIC1.79□□□□□ -2.12
CAPN3P20807 AL359821.1-201ENST00000605519 182 ntBASIC1.79□□□□□ -2.12
CAPN3P20807 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
CAPN3P20807 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.79□□□□□ -2.12
CAPN3P20807 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CAPN3P20807 AC073544.1-201ENST00000600110 1595 ntBASIC1.79□□□□□ -2.12
CAPN3P20807 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CAPN3P20807 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 RNU6-271P-201ENST00000363858 105 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 MIR562-201ENST00000384894 95 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 SNORA75.6-201ENST00000391318 127 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 MRPS10P1-201ENST00000448483 130 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 MTND4P17-201ENST00000470444 350 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.78□□□□□ -2.12
CAPN3P20807 AC079140.2-201ENST00000506193 142 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.78□□□□□ -2.12
CAPN3P20807 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 AC144568.1-201ENST00000520139 137 ntBASIC1.78□□□□□ -2.12
CAPN3P20807 RNU6-1188P-201ENST00000363795 107 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RNU6-1310P-201ENST00000384153 107 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RNU6-1065P-201ENST00000384513 106 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 SNORA69.1-201ENST00000390904 137 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RPL21P1-201ENST00000399532 476 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RNA5SP475-201ENST00000410568 110 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RBMX2P4-201ENST00000441256 376 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 Y_RNA.653-201ENST00000459091 95 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.77□□□□□ -2.13
CAPN3P20807 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.77□□□□□ -2.13
CAPN3P20807 RNU6-559P-201ENST00000516151 98 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RNU6-970P-201ENST00000516312 107 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RPL21P9-201ENST00000556149 474 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 AL162424.1-201ENST00000602325 221 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 AL355073.2-201ENST00000612106 557 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 MIR1244-1-201ENST00000612829 85 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 MIR1244-3-201ENST00000635744 85 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 MIR1244-2-201ENST00000636449 85 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 MIR1244-4-202ENST00000636813 85 ntBASIC1.77□□□□□ -2.13
CAPN3P20807 RNU6-1123P-201ENST00000362347 106 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 RNU6-99P-201ENST00000364721 107 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 SNORD48-201ENST00000364953 64 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 Y_RNA.384-201ENST00000383909 102 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 RNU6-1297P-201ENST00000384415 104 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 SNORA67.5-201ENST00000391036 107 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 MTCO3P19-201ENST00000415864 321 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 BTF3P4-201ENST00000418852 495 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 AL445685.2-201ENST00000422551 342 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.76□□□□□ -2.13
CAPN3P20807 AC245047.3-201ENST00000429428 127 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 RNU6-625P-201ENST00000459412 107 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.76□□□□□ -2.13
CAPN3P20807 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.76□□□□□ -2.13
CAPN3P20807 AC018448.1-201ENST00000552843 316 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 FRG2DP-202ENST00000566967 323 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 MIR3683-201ENST00000580847 82 ntBASIC1.76□□□□□ -2.13
CAPN3P20807 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.76□□□□□ -2.13
CAPN3P20807 MIR410-201ENST00000362222 80 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 RNU6-874P-201ENST00000362390 105 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 RNA5SP361-201ENST00000362686 118 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 RNA5SP109-201ENST00000391010 116 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 MRPL42P3-201ENST00000401492 326 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 RPS26P55-201ENST00000471178 356 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 AC010469.2-201ENST00000496412 480 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 AC005840.1-201ENST00000498412 377 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 MIR3937-201ENST00000580135 106 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.75□□□□□ -2.13
CAPN3P20807 RBM11P1-201ENST00000604951 799 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 AL121890.5-201ENST00000620848 304 ntBASIC1.75□□□□□ -2.13
CAPN3P20807 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.74□□□□□ -2.13
CAPN3P20807 Y_RNA.142-201ENST00000363491 102 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 SNORA4.2-201ENST00000365313 147 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 Y_RNA.387-201ENST00000383918 102 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 RNU6-310P-201ENST00000384655 107 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 AL034345.1-201ENST00000407768 123 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 AC004965.1-201ENST00000413033 213 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 AL161935.2-201ENST00000414627 60 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 AC022493.2-201ENST00000506122 481 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.74□□□□□ -2.13
CAPN3P20807 SNORA25.15-201ENST00000516487 89 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 RNU6-1213P-201ENST00000517075 94 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 AC027419.1-201ENST00000522976 328 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 AC110588.1-201ENST00000559699 137 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 UBE2V2P2-201ENST00000587677 504 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 U6.108-201ENST00000637764 58 ntBASIC1.74□□□□□ -2.13
CAPN3P20807 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CAPN3P20807 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.74□□□□□ -2.13
CAPN3P20807 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
CAPN3P20807 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 SNORD1A-201ENST00000364968 72 ntBASIC1.73□□□□□ -2.13
CAPN3P20807 MIR489-201ENST00000384923 84 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms