Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MIR4422-201ENST00000581938 83 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 AC022217.4-201ENST00000604389 163 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 AL132765.2-201ENST00000610812 351 ntBASIC1.59□□□□□ -2.15
ERCC2P18074 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
ERCC2P18074 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
ERCC2P18074 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
ERCC2P18074 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.58□□□□□ -2.16
ERCC2P18074 MIR302D-201ENST00000362275 68 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 SNORD1A-201ENST00000364968 72 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 RNU6-1264P-201ENST00000383891 107 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 RNU6-318P-201ENST00000384283 103 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 MIR194-1-201ENST00000384892 85 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 RPS20P15-201ENST00000412792 311 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 AC010154.1-201ENST00000425857 269 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 PCNPP5-201ENST00000452246 481 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 Y_RNA.653-201ENST00000459091 95 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 RNU6-237P-201ENST00000515985 71 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 RNU7-99P-201ENST00000516271 62 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 RNU6-875P-201ENST00000516488 106 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 RN7SKP49-201ENST00000516675 260 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 AC023157.2-201ENST00000540596 141 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.58□□□□□ -2.16
ERCC2P18074 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.58□□□□□ -2.16
ERCC2P18074 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.58□□□□□ -2.16
ERCC2P18074 MIR548S-201ENST00000581352 82 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 MIR4769-201ENST00000584126 77 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 AL929325.1-201ENST00000603096 117 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.58□□□□□ -2.16
ERCC2P18074 MTND4LP32-201ENST00000636111 270 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 MIR1302-1-201ENST00000637932 143 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
ERCC2P18074 ZNF72P-201ENST00000425869 1908 ntBASIC1.58□□□□□ -2.16
ERCC2P18074 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
ERCC2P18074 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
ERCC2P18074 RNU1-17P-201ENST00000363022 152 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 Y_RNA.387-201ENST00000383918 102 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 Y_RNA.577-201ENST00000384794 101 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.57□□□□□ -2.16
ERCC2P18074 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.57□□□□□ -2.16
ERCC2P18074 RPS26P55-201ENST00000471178 356 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 RPS27P22-201ENST00000478056 241 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 AC010469.2-201ENST00000496412 480 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 AC010598.1-201ENST00000510378 103 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 AC074133.1-201ENST00000515696 183 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.57□□□□□ -2.16
ERCC2P18074 SNORA31.10-201ENST00000516482 106 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.57□□□□□ -2.16
ERCC2P18074 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.57□□□□□ -2.16
ERCC2P18074 AC018448.1-201ENST00000552843 316 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 MIR4438-201ENST00000585271 93 ntBASIC1.57□□□□□ -2.16
ERCC2P18074 AC073544.1-201ENST00000600110 1595 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 Y_RNA.259-201ENST00000364619 101 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 Y_RNA.384-201ENST00000383909 102 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 Y_RNA.498-201ENST00000384460 102 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 SNORD116-29-201ENST00000384516 83 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 RNU6-1156P-201ENST00000410365 100 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 AC004965.1-201ENST00000413033 213 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 AC114482.1-201ENST00000418010 247 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.56□□□□□ -2.16
ERCC2P18074 MRPS10P1-201ENST00000448483 130 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 RNU6-470P-201ENST00000515954 104 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 RNU6-507P-201ENST00000516045 100 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.56□□□□□ -2.16
ERCC2P18074 AL442163.3-201ENST00000554110 156 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 SUB1P3-201ENST00000564581 315 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 AC015688.6-201ENST00000577737 104 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 AC006435.5-201ENST00000624486 112 ntBASIC1.56□□□□□ -2.16
ERCC2P18074 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ERCC2P18074 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ERCC2P18074 RNU6-60P-201ENST00000364792 103 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 SNORA20B-201ENST00000384220 132 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 RNY3P14-201ENST00000384309 102 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 RNU6-950P-201ENST00000384651 107 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 MIR625-201ENST00000385047 85 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 MTCYBP4-201ENST00000401524 249 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AL355796.1-201ENST00000406706 323 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AC093019.1-201ENST00000443135 252 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 MTND5P20-201ENST00000448677 143 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AC099513.1-201ENST00000490423 301 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.55□□□□□ -2.16
ERCC2P18074 AC105758.1-201ENST00000506038 399 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AL355375.2-201ENST00000574825 175 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AC080078.3-201ENST00000605407 463 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AC025253.1-201ENST00000613623 543 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 AC087588.2-201ENST00000617667 426 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 MIR8054-201ENST00000620877 86 ntBASIC1.55□□□□□ -2.16
ERCC2P18074 RNU6-1301P-201ENST00000362724 104 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 RNA5SP99-201ENST00000364020 114 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
ERCC2P18074 RNU6-1009P-201ENST00000390996 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms