Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MTND2P38-201ENST00000522536 667 ntBASIC-1.36□□□□□ -2.63
HMGA1P17096 DEFB131E-202ENST00000602581 683 ntBASIC-1.36□□□□□ -2.63
HMGA1P17096 U6.42-201ENST00000618440 107 ntBASIC-1.36□□□□□ -2.63
HMGA1P17096 MIRLET7C-201ENST00000362160 84 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 U8.5-201ENST00000364528 136 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 RNU6-384P-201ENST00000364900 104 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 RNU6-116P-201ENST00000384042 109 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 AC008134.1-201ENST00000420943 193 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.37□□□□□ -2.63
HMGA1P17096 AP001372.4-201ENST00000524889 472 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-1.37□□□□□ -2.63
HMGA1P17096 AL512347.1-201ENST00000566420 503 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 AC008752.3-201ENST00000588113 712 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 AC009994.1-201ENST00000606889 253 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 MIR4251-201ENST00000635819 61 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 MIR198-201ENST00000637333 62 ntBASIC-1.37□□□□□ -2.63
HMGA1P17096 MIR377-201ENST00000362145 69 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-744P-201ENST00000365557 107 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 MIR601-201ENST00000385256 79 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 AL590002.1-201ENST00000406554 418 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-447P-201ENST00000410293 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-355P-201ENST00000410427 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-791P-201ENST00000410467 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-705P-201ENST00000410601 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-860P-201ENST00000410860 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNU6-785P-201ENST00000411324 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 PIGPP3-201ENST00000425307 415 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 AL133396.1-201ENST00000432048 687 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 PCNPP5-201ENST00000452246 481 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 PRDX4P1-201ENST00000507189 574 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 AC046134.1-201ENST00000514454 666 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 RNA5SP216-201ENST00000516111 123 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-1.38□□□□□ -2.63
HMGA1P17096 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.38□□□□□ -2.63
HMGA1P17096 U6.90-201ENST00000614007 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 U6.70-201ENST00000620287 104 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 AC103706.2-201ENST00000638080 240 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 AC132825.7-201ENST00000638744 335 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 AC091304.10-201ENST00000641554 121 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.38□□□□□ -2.63
HMGA1P17096 CDR1-202ENST00000625883 1485 ntBASIC-1.38□□□□□ -2.63
HMGA1P17096 MTND4P9-201ENST00000507819 1346 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 RNU6-692P-201ENST00000384496 107 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 MIR802-201ENST00000390235 94 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.39□□□□□ -2.63
HMGA1P17096 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 RNU7-99P-201ENST00000516271 62 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 RNU7-43P-201ENST00000516554 64 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 RNU6-706P-201ENST00000517229 104 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 AC023632.1-201ENST00000518463 375 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-1.39□□□□□ -2.63
HMGA1P17096 AC103996.1-201ENST00000555468 102 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 ZNF971P-201ENST00000562068 1249 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 AL022154.1-201ENST00000604698 785 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 U7.6-201ENST00000610841 64 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 AC105081.1-201ENST00000617727 106 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 RMST_7.1-201ENST00000621935 268 ntBASIC-1.39□□□□□ -2.63
HMGA1P17096 RNU6-396P-201ENST00000365369 105 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 RNU6-650P-201ENST00000365658 111 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 RNU6-190P-201ENST00000384154 102 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.4□□□□□ -2.63
HMGA1P17096 RNA5SP180-201ENST00000516181 101 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 RNU6-448P-201ENST00000517052 107 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 AC018448.1-201ENST00000552843 316 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.4□□□□□ -2.63
HMGA1P17096 AL139022.2-201ENST00000606934 443 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.4□□□□□ -2.63
HMGA1P17096 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.4□□□□□ -2.63
HMGA1P17096 AC120349.2-201ENST00000625002 298 ntBASIC-1.4□□□□□ -2.63
HMGA1P17096 RNU6-552P-201ENST00000362869 119 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 RNU6-580P-201ENST00000365159 107 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 MIR452-201ENST00000385020 85 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 SNORA26.5-201ENST00000391215 123 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 RNA5SP118-201ENST00000410385 109 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 ELOCP21-201ENST00000412558 336 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 RNU7-57P-201ENST00000459540 60 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 AC021146.6-201ENST00000514659 117 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 RNA5SP66-201ENST00000517178 101 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.41□□□□□ -2.64
HMGA1P17096 FGF7P1-201ENST00000582820 288 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 AP001033.2-201ENST00000609701 1003 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 AC134878.1-201ENST00000619901 243 ntBASIC-1.41□□□□□ -2.64
HMGA1P17096 RNU6-353P-201ENST00000364266 108 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 RNU6-853P-201ENST00000364306 107 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 SNORA36A-201ENST00000384221 132 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 MTCO2P33-201ENST00000402100 465 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 MIR1468-201ENST00000410600 86 ntBASIC-1.42□□□□□ -2.64
HMGA1P17096 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms