Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MIR5696-201ENST00000578474 85 ntBASIC0.56□□□□□ -2.32
CTLA4P16410 AL590095.2-201ENST00000604136 117 ntBASIC0.56□□□□□ -2.32
CTLA4P16410 RN7SKP299-201ENST00000606679 301 ntBASIC0.56□□□□□ -2.32
CTLA4P16410 AL138726.1-201ENST00000614873 333 ntBASIC0.56□□□□□ -2.32
CTLA4P16410 Y_RNA.184-201ENST00000363884 108 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 Y_RNA.372-201ENST00000365599 102 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 Y_RNA.373-201ENST00000365600 103 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 RNU6-259P-201ENST00000383999 107 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 MIR562-201ENST00000384894 95 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 MIR517A-201ENST00000385001 87 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 U8.16-201ENST00000391279 133 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AL355796.1-201ENST00000406706 323 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 CALM2P4-201ENST00000430810 426 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 RPL39P39-201ENST00000455840 151 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 RPS29P1-201ENST00000465274 159 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 RPS26P48-201ENST00000491713 339 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC010469.2-201ENST00000496412 480 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 OR9P1P-201ENST00000496431 281 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC022493.2-201ENST00000506122 481 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.55□□□□□ -2.32
CTLA4P16410 AC010486.3-201ENST00000511602 785 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC097462.1-201ENST00000514125 324 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 Y_RNA.665-201ENST00000516177 98 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 RNU6-947P-201ENST00000516264 106 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC090142.3-201ENST00000519012 385 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC023157.2-201ENST00000540596 141 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC004812.1-201ENST00000540773 146 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AL512360.1-201ENST00000555346 234 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 ZNF519P2-201ENST00000557032 169 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.55□□□□□ -2.32
CTLA4P16410 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.55□□□□□ -2.32
CTLA4P16410 AC010620.1-201ENST00000601088 1102 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 7SK.7-201ENST00000603504 247 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 DISC2.1-201ENST00000612827 205 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.55□□□□□ -2.32
CTLA4P16410 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.55□□□□□ -2.32
CTLA4P16410 Y_RNA.135-201ENST00000363439 95 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 Y_RNA.191-201ENST00000363972 113 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 Y_RNA.265-201ENST00000364677 108 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CTLA4P16410 RNU6-969P-201ENST00000383900 105 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 MIR10B-201ENST00000385011 110 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.54□□□□□ -2.32
CTLA4P16410 RPL30P16-201ENST00000419341 429 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 ZNF885P-201ENST00000420174 1098 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AL590632.1-201ENST00000424289 371 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AL445305.1-201ENST00000432577 575 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 MTCO3P18-201ENST00000440206 761 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 MTCO2P7-201ENST00000446518 666 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 RNU6-405P-201ENST00000516637 110 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 RNU6-341P-201ENST00000516973 96 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC091144.1-201ENST00000519573 138 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC134698.4-201ENST00000523451 826 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 RPL21P9-201ENST00000556149 474 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC010525.2-201ENST00000590920 195 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC068790.6-201ENST00000602558 258 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AL162413.1-201ENST00000603198 110 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 PRELID3BP2-201ENST00000605362 201 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC019193.3-201ENST00000609144 554 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 AC010999.1-201ENST00000611856 324 ntBASIC0.54□□□□□ -2.32
CTLA4P16410 Y_RNA.530-201ENST00000384587 101 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 Y_RNA.615-201ENST00000410769 117 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 RPS3AP1-201ENST00000413190 320 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 AC243428.1-201ENST00000421099 264 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.53□□□□□ -2.32
CTLA4P16410 RNU7-21P-201ENST00000459430 62 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 RNU7-175P-201ENST00000515915 61 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 RNU7-172P-201ENST00000517125 64 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.53□□□□□ -2.32
CTLA4P16410 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.53□□□□□ -2.32
CTLA4P16410 MTND1P15-201ENST00000579262 949 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 MIR3684-201ENST00000579779 74 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 AC091178.2-201ENST00000584401 117 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 MIR3611-201ENST00000584484 83 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 AC124303.1-201ENST00000605703 360 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 AC092954.2-201ENST00000609103 430 ntBASIC0.53□□□□□ -2.32
CTLA4P16410 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.53□□□□□ -2.32
CTLA4P16410 RNU6-1252P-201ENST00000363054 104 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 SNORA25.9-201ENST00000365087 128 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 RNU6-596P-201ENST00000365395 98 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CTLA4P16410 RNA5SP482-201ENST00000391269 118 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 RNU6-908P-201ENST00000410160 94 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 RNU2-66P-201ENST00000410650 161 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.52□□□□□ -2.33
CTLA4P16410 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.52□□□□□ -2.33
CTLA4P16410 RNU7-66P-201ENST00000459469 62 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 HMGN2P26-201ENST00000463169 339 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 AP000870.1-201ENST00000472927 406 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.52□□□□□ -2.33
CTLA4P16410 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.52□□□□□ -2.33
CTLA4P16410 AC107401.1-201ENST00000503426 685 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 AC019235.1-201ENST00000503847 207 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 RNU7-12P-201ENST00000516030 62 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 RNU6-1281P-201ENST00000516223 105 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 Y_RNA.683-201ENST00000516508 93 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 RNU6-256P-201ENST00000516747 97 ntBASIC0.52□□□□□ -2.33
CTLA4P16410 RNU2-56P-201ENST00000516826 190 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 319.5 ms