Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AL096861.1-201ENST00000610899 123 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 AC131159.1-201ENST00000621854 213 ntBASIC-0.4□□□□□ -2.47
COL6A3P12111 RNU6-545P-201ENST00000362681 104 ntBASIC-0.41□□□□□ -2.47
COL6A3P12111 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.41□□□□□ -2.47
COL6A3P12111 RNU6-726P-201ENST00000364680 107 ntBASIC-0.41□□□□□ -2.47
COL6A3P12111 AL663109.1-201ENST00000411498 844 ntBASIC-0.41□□□□□ -2.47
COL6A3P12111 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.41□□□□□ -2.47
COL6A3P12111 AC010468.3-201ENST00000508225 458 ntBASIC-0.41□□□□□ -2.47
COL6A3P12111 SNORA27.4-201ENST00000516650 95 ntBASIC-0.41□□□□□ -2.47
COL6A3P12111 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.41□□□□□ -2.47
COL6A3P12111 AC138915.2-201ENST00000569776 97 ntBASIC-0.41□□□□□ -2.47
COL6A3P12111 RNU6-359P-201ENST00000365466 108 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 RNU6-811P-201ENST00000384069 107 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 RNU6-187P-201ENST00000384139 106 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 RNU6-1026P-201ENST00000384465 108 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 SNORD100-201ENST00000408573 76 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AC107401.1-201ENST00000503426 685 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AC115990.1-201ENST00000526957 301 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 SNRPGP1-201ENST00000553864 222 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 SNORA25.7-201ENST00000364375 127 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 RNU6-166P-201ENST00000384371 107 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AC245047.3-201ENST00000429428 127 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AL627311.1-201ENST00000431514 115 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AC002542.1-201ENST00000440683 193 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.41□□□□□ -2.48
COL6A3P12111 MTCO3P9-201ENST00000506989 781 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 DEFB130C-202ENST00000530001 230 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.41□□□□□ -2.48
COL6A3P12111 MIR378D2-201ENST00000580636 98 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.41□□□□□ -2.48
COL6A3P12111 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.41□□□□□ -2.48
COL6A3P12111 AC104260.1-201ENST00000616660 539 ntBASIC-0.41□□□□□ -2.48
COL6A3P12111 RNU6-47P-201ENST00000383866 107 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6-417P-201ENST00000384712 107 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 MIR204-201ENST00000385200 110 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 MTND3P20-201ENST00000407663 186 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6-293P-201ENST00000411259 106 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 MCFD2P1-201ENST00000417812 300 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 BX119904.4-201ENST00000424402 301 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RPS24P1-201ENST00000438550 371 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 AC092427.1-201ENST00000439177 601 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6-914P-201ENST00000516749 109 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 MIR5706-201ENST00000579841 80 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 MIR4753-201ENST00000585119 83 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 AC006380.1-201ENST00000603598 186 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 AC104073.3-201ENST00000610942 955 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 AC084368.1-201ENST00000620935 65 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 SNORA33-201ENST00000363664 130 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 SNORA2.2-201ENST00000365473 135 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 RNU6-975P-201ENST00000384296 105 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 SNORD41-201ENST00000386967 70 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.42□□□□□ -2.48
COL6A3P12111 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A3P12111 AC074290.1-201ENST00000448883 135 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.42□□□□□ -2.48
COL6A3P12111 AC113347.3-201ENST00000509113 148 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.42□□□□□ -2.48
COL6A3P12111 SNORD98-201ENST00000636377 67 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 CDR1-202ENST00000625883 1485 ntBASIC-0.42□□□□□ -2.48
COL6A3P12111 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 MIR563-201ENST00000385080 79 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 MIR16-1-201ENST00000385271 89 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 SNORA3B-201ENST00000391305 131 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 MIR1283-1-201ENST00000408494 87 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 USP9YP28-201ENST00000435142 589 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC116562.3-201ENST00000506136 177 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 HSPE1P23-201ENST00000509838 286 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 SNORA18.7-201ENST00000516910 131 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A3P12111 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.43□□□□□ -2.48
COL6A3P12111 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.43□□□□□ -2.48
COL6A3P12111 ZNF971P-201ENST00000562068 1249 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A3P12111 AC234772.3-201ENST00000602277 528 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC064872.1-201ENST00000604823 1072 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 Z99289.3-201ENST00000605586 594 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 SNORD18.1-201ENST00000363807 70 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU6-395P-201ENST00000365662 106 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 Y_RNA.534-201ENST00000384599 112 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 MIR1253-201ENST00000408273 105 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC006210.1-201ENST00000424882 111 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AP000870.1-201ENST00000472927 406 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A3P12111 RNU7-12P-201ENST00000516030 62 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.43□□□□□ -2.48
COL6A3P12111 MIR3152-201ENST00000579801 74 ntBASIC-0.43□□□□□ -2.48
COL6A3P12111 MIR5006-201ENST00000583027 110 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms