Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC100810.6-201ENST00000638068 285 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 MTND4P12-201ENST00000498999 1377 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 ZNF204P-201ENST00000416749 2397 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 BX322639.1-202ENST00000423987 2213 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.82□□□□□ -2.28
COL11A1P12107 AC245060.5-201ENST00000610778 3293 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNU6-862P-201ENST00000362804 105 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 Y_RNA.166-201ENST00000363730 102 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNA5SP493-201ENST00000364115 91 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 Y_RNA.274-201ENST00000364714 101 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 RNU6-99P-201ENST00000364721 107 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 Y_RNA.450-201ENST00000384198 113 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 Y_RNA.473-201ENST00000384333 102 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 MIR32-201ENST00000384965 70 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AL356776.1-201ENST00000406574 447 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 Z82188.1-201ENST00000436709 154 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 HSPE1P21-201ENST00000438283 308 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.82□□□□□ -2.28
COL11A1P12107 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.82□□□□□ -2.28
COL11A1P12107 MIR2355-201ENST00000517199 87 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC133485.1-201ENST00000567176 124 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC138907.6-201ENST00000568401 126 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AC096720.1-201ENST00000604441 183 ntBASIC0.82□□□□□ -2.28
COL11A1P12107 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.82□□□□□ -2.28
COL11A1P12107 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
COL11A1P12107 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.82□□□□□ -2.28
COL11A1P12107 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL11A1P12107 MIR424-201ENST00000362227 98 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 RNU6-545P-201ENST00000362681 104 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 RNY1P16-201ENST00000363063 111 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 SNORA72.1-201ENST00000363485 129 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 RNU6-873P-201ENST00000363833 107 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 SNORD81.2-201ENST00000365153 76 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL11A1P12107 SNORA67.2-201ENST00000384300 149 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 RNY3P14-201ENST00000384309 102 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 Y_RNA.471-201ENST00000384312 102 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 MIR10B-201ENST00000385011 110 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 SNORA12.2-201ENST00000391040 156 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
COL11A1P12107 MIR1283-1-201ENST00000408494 87 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 RNA5SP494-201ENST00000410653 129 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 AC107399.1-201ENST00000451226 265 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 NDUFB4P10-201ENST00000452541 359 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 RNU6-875P-201ENST00000516488 106 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 RNU6-344P-201ENST00000516635 111 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 Y_RNA.718-201ENST00000517110 102 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.81□□□□□ -2.28
COL11A1P12107 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 PISRT1.1-201ENST00000616930 107 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 ZNF299P-201ENST00000406845 1804 ntBASIC0.81□□□□□ -2.28
COL11A1P12107 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
COL11A1P12107 Y_RNA.86-201ENST00000363020 111 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 U3.9-201ENST00000363823 204 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNU6-595P-201ENST00000363944 107 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 SNORD115-32-201ENST00000364079 82 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 MIR320B2-201ENST00000408479 138 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNU2-7P-201ENST00000410794 178 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RPS26P42-201ENST00000413485 326 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC093019.1-201ENST00000443135 252 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 PCNPP5-201ENST00000452246 481 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC016925.1-201ENST00000458303 298 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNU7-14P-201ENST00000459331 62 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC087477.1-201ENST00000465747 340 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC117454.1-201ENST00000491120 168 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC145146.1-201ENST00000496370 254 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 PRDX4P1-201ENST00000507189 574 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.8□□□□□ -2.28
COL11A1P12107 RNU7-175P-201ENST00000515915 61 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNA5SP404-201ENST00000517118 132 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.8□□□□□ -2.28
COL11A1P12107 AC027288.2-201ENST00000553028 243 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC063943.3-201ENST00000615562 356 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AL121890.5-201ENST00000620848 304 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 SNORD50.1-201ENST00000362987 71 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 Y_RNA.99-201ENST00000363138 105 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNA5SP499-201ENST00000363982 119 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNU6-743P-201ENST00000364151 106 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 SNORD31B-201ENST00000364977 69 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 SNORA36A-201ENST00000384221 132 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNU6-95P-201ENST00000384697 107 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 MIR549A-201ENST00000385268 96 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 SNORA69.1-201ENST00000390904 137 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 MIR1267-201ENST00000408723 78 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 RNU4-14P-201ENST00000410858 122 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC004866.1-201ENST00000411748 78 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 Y_RNA.653-201ENST00000459091 95 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC093303.1-201ENST00000514549 295 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.8□□□□□ -2.28
COL11A1P12107 MIR4790-201ENST00000577799 79 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 AL355073.2-201ENST00000612106 557 ntBASIC0.8□□□□□ -2.28
COL11A1P12107 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.8□□□□□ -2.28
COL11A1P12107 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.79□□□□□ -2.28
COL11A1P12107 RNU4-73P-201ENST00000363164 141 ntBASIC0.79□□□□□ -2.28
COL11A1P12107 RNU5F-3P-201ENST00000363767 117 ntBASIC0.79□□□□□ -2.28
COL11A1P12107 Y_RNA.179-201ENST00000363844 90 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms