Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A2P08572 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A2P08572 UBL5P1-201ENST00000507979 193 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 SNORA40.12-201ENST00000516329 111 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 RNU7-40P-201ENST00000516397 64 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 AC019288.1-201ENST00000557918 224 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A2P08572 SNORD11B-201ENST00000607707 90 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 AC243829.6-201ENST00000612652 106 ntBASIC0.59□□□□□ -2.31
COL4A2P08572 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.59□□□□□ -2.31
COL4A2P08572 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.59□□□□□ -2.31
COL4A2P08572 HSBP1P2-201ENST00000299671 229 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 RNU5F-3P-201ENST00000363767 117 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 RNU6-1187P-201ENST00000364771 110 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 RNU6-1031P-201ENST00000384773 107 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC008134.1-201ENST00000420943 193 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 MTCO1P20-201ENST00000425366 358 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.58□□□□□ -2.32
COL4A2P08572 RNU7-34P-201ENST00000459394 64 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 RPL39P28-201ENST00000465655 155 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 RPL39P38-201ENST00000467018 153 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC107401.1-201ENST00000503426 685 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 RNU6-947P-201ENST00000516264 106 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.58□□□□□ -2.32
COL4A2P08572 AL512360.1-201ENST00000555346 234 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC097065.2-201ENST00000608159 533 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 GHRLOS.1-201ENST00000610995 70 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC040896.1-201ENST00000613819 479 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 SCARNA4-201ENST00000629045 128 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
COL4A2P08572 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.58□□□□□ -2.32
COL4A2P08572 RNU6-483P-201ENST00000384088 108 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 MIR153-2-201ENST00000385225 87 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 CALM2P3-201ENST00000400429 449 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.58□□□□□ -2.32
COL4A2P08572 DYNLT3P2-201ENST00000442517 295 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC098826.2-201ENST00000452011 651 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 RNU7-175P-201ENST00000515915 61 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 ACA59.1-201ENST00000515966 143 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.58□□□□□ -2.32
COL4A2P08572 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 MIR4273-201ENST00000582824 84 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 MIR3672-201ENST00000584290 82 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AL390123.1-201ENST00000603216 237 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC022217.4-201ENST00000604389 163 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 BX284668.6-201ENST00000606899 438 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.58□□□□□ -2.32
COL4A2P08572 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.58□□□□□ -2.32
COL4A2P08572 AC068137.4-201ENST00000638485 296 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC068137.3-201ENST00000639191 341 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 AC099654.12-201ENST00000639868 649 ntBASIC0.58□□□□□ -2.32
COL4A2P08572 SNORD50.1-201ENST00000362987 71 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 MIR517A-201ENST00000385001 87 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 MIR487A-201ENST00000385009 80 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 MTCO3P40-201ENST00000392516 676 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 AL356776.1-201ENST00000406574 447 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 RNU6-648P-201ENST00000410190 107 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 ZNF885P-201ENST00000420174 1098 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 SEPT14P3-201ENST00000439401 183 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 AL732372.2-207ENST00000445840 183 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 SEPT14P2-201ENST00000453405 183 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.57□□□□□ -2.32
COL4A2P08572 MTND1P11-201ENST00000456661 876 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A2P08572 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A2P08572 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A2P08572 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A2P08572 SEPT14P4-201ENST00000513445 186 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 SNORA31.4-201ENST00000516049 129 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 RNU6-314P-201ENST00000516574 104 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 RNU1-117P-201ENST00000517041 158 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 FO082796.1-201ENST00000523795 183 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.57□□□□□ -2.32
COL4A2P08572 NBR2-204ENST00000587322 63 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 AC068790.6-201ENST00000602558 258 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 AL022345.2-201ENST00000606307 135 ntBASIC0.57□□□□□ -2.32
COL4A2P08572 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.56□□□□□ -2.32
COL4A2P08572 AC073544.1-201ENST00000600110 1595 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 U3.8-201ENST00000363675 217 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 SNORD115-32-201ENST00000364079 82 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 Y_RNA.280-201ENST00000364765 112 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 SNORD87-201ENST00000364849 89 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 RNU4-9P-201ENST00000364951 139 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 RNU6-1119P-201ENST00000384349 108 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 AL034345.1-201ENST00000407768 123 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 RNA5SP511-201ENST00000410487 115 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.56□□□□□ -2.32
COL4A2P08572 AC245047.3-201ENST00000429428 127 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 RPS20P10-201ENST00000451209 253 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 AL133373.1-201ENST00000497098 94 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 SNORA31.10-201ENST00000516482 106 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 APOOP3-201ENST00000536787 586 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 RPL21P9-201ENST00000556149 474 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 MTND1P15-201ENST00000579262 949 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 AC106754.2-201ENST00000623006 233 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 AC067863.3-201ENST00000624172 122 ntBASIC0.56□□□□□ -2.32
COL4A2P08572 RNU6-727P-201ENST00000363592 107 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 RNU6-873P-201ENST00000363833 107 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 RNU1-36P-201ENST00000365130 165 ntBASIC0.55□□□□□ -2.32
COL4A2P08572 SNORD116-1-201ENST00000384335 95 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms