Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RNU6-1274P-201ENST00000384557 107 ntBASIC3.53□□□□□ -1.84
THBS1P07996 Y_RNA.666-201ENST00000516187 112 ntBASIC3.53□□□□□ -1.84
THBS1P07996 RNU6-586P-201ENST00000517265 104 ntBASIC3.53□□□□□ -1.84
THBS1P07996 MIR3163-201ENST00000581592 73 ntBASIC3.53□□□□□ -1.84
THBS1P07996 MIR6075-201ENST00000620782 95 ntBASIC3.53□□□□□ -1.84
THBS1P07996 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
THBS1P07996 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
THBS1P07996 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
THBS1P07996 AC018630.2-201ENST00000534866 2403 ntBASIC3.52□□□□□ -1.85
THBS1P07996 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
THBS1P07996 RNU6-944P-201ENST00000364023 107 ntBASIC3.52□□□□□ -1.85
THBS1P07996 SNORA63D-201ENST00000364359 132 ntBASIC3.52□□□□□ -1.85
THBS1P07996 MIR554-201ENST00000384874 96 ntBASIC3.52□□□□□ -1.85
THBS1P07996 MIR1912-201ENST00000410389 80 ntBASIC3.52□□□□□ -1.85
THBS1P07996 AL358944.1-201ENST00000528537 144 ntBASIC3.52□□□□□ -1.85
THBS1P07996 AC004486.1-201ENST00000546846 233 ntBASIC3.52□□□□□ -1.85
THBS1P07996 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.52□□□□□ -1.85
THBS1P07996 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.52□□□□□ -1.85
THBS1P07996 AC006111.3-201ENST00000622137 383 ntBASIC3.52□□□□□ -1.85
THBS1P07996 MIR6500-201ENST00000622700 86 ntBASIC3.52□□□□□ -1.85
THBS1P07996 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.52□□□□□ -1.85
THBS1P07996 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.52□□□□□ -1.85
THBS1P07996 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
THBS1P07996 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
THBS1P07996 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
THBS1P07996 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
THBS1P07996 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
THBS1P07996 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
THBS1P07996 Y_RNA.253-201ENST00000364562 112 ntBASIC3.51□□□□□ -1.85
THBS1P07996 MIR548D2-201ENST00000384955 97 ntBASIC3.51□□□□□ -1.85
THBS1P07996 MIR548A2-201ENST00000384956 97 ntBASIC3.51□□□□□ -1.85
THBS1P07996 MIR802-201ENST00000390235 94 ntBASIC3.51□□□□□ -1.85
THBS1P07996 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
THBS1P07996 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.51□□□□□ -1.85
THBS1P07996 AP000567.1-201ENST00000406413 156 ntBASIC3.51□□□□□ -1.85
THBS1P07996 RNA5SP38-201ENST00000410750 119 ntBASIC3.51□□□□□ -1.85
THBS1P07996 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
THBS1P07996 AL139247.1-201ENST00000422768 325 ntBASIC3.51□□□□□ -1.85
THBS1P07996 PGBD4P5-201ENST00000445958 426 ntBASIC3.51□□□□□ -1.85
THBS1P07996 snoU13.22-201ENST00000459428 104 ntBASIC3.51□□□□□ -1.85
THBS1P07996 RNU6-830P-201ENST00000516353 107 ntBASIC3.51□□□□□ -1.85
THBS1P07996 AC023632.4-201ENST00000517783 191 ntBASIC3.51□□□□□ -1.85
THBS1P07996 AC021443.1-201ENST00000604478 211 ntBASIC3.51□□□□□ -1.85
THBS1P07996 U7.8-201ENST00000619968 63 ntBASIC3.51□□□□□ -1.85
THBS1P07996 AC012442.3-202ENST00000636742 206 ntBASIC3.51□□□□□ -1.85
THBS1P07996 TNPO1P3-201ENST00000436471 2662 ntBASIC3.51□□□□□ -1.85
THBS1P07996 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
THBS1P07996 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
THBS1P07996 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
THBS1P07996 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
THBS1P07996 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
THBS1P07996 ZNF720P1-201ENST00000562403 1939 ntBASIC3.5□□□□□ -1.85
THBS1P07996 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
THBS1P07996 MIR494-201ENST00000349529 81 ntBASIC3.5□□□□□ -1.85
THBS1P07996 Y_RNA.10-201ENST00000362371 110 ntBASIC3.5□□□□□ -1.85
THBS1P07996 Y_RNA.265-201ENST00000364677 108 ntBASIC3.5□□□□□ -1.85
THBS1P07996 Y_RNA.298-201ENST00000364960 107 ntBASIC3.5□□□□□ -1.85
THBS1P07996 Y_RNA.342-201ENST00000365352 113 ntBASIC3.5□□□□□ -1.85
THBS1P07996 SNORA2.2-201ENST00000365473 135 ntBASIC3.5□□□□□ -1.85
THBS1P07996 MIR518F-201ENST00000384973 87 ntBASIC3.5□□□□□ -1.85
THBS1P07996 U8.17-201ENST00000391292 132 ntBASIC3.5□□□□□ -1.85
THBS1P07996 RNU6-592P-201ENST00000411333 103 ntBASIC3.5□□□□□ -1.85
THBS1P07996 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.5□□□□□ -1.85
THBS1P07996 AC099677.2-201ENST00000436385 175 ntBASIC3.5□□□□□ -1.85
THBS1P07996 RNU7-170P-201ENST00000459303 61 ntBASIC3.5□□□□□ -1.85
THBS1P07996 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.5□□□□□ -1.85
THBS1P07996 RN7SKP83-201ENST00000516512 178 ntBASIC3.5□□□□□ -1.85
THBS1P07996 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.5□□□□□ -1.85
THBS1P07996 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.5□□□□□ -1.85
THBS1P07996 CR392039.5-201ENST00000623201 510 ntBASIC3.5□□□□□ -1.85
THBS1P07996 MIR3202-2-201ENST00000635980 79 ntBASIC3.5□□□□□ -1.85
THBS1P07996 AL162726.3-218ENST00000636401 95 ntBASIC3.5□□□□□ -1.85
THBS1P07996 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
THBS1P07996 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
THBS1P07996 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
THBS1P07996 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
THBS1P07996 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 ZNF271P-202ENST00000465539 1970 ntBASIC3.49□□□□□ -1.85
THBS1P07996 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
THBS1P07996 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.49□□□□□ -1.85
THBS1P07996 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.49□□□□□ -1.85
THBS1P07996 SNORA71.3-201ENST00000362582 128 ntBASIC3.49□□□□□ -1.85
THBS1P07996 RNU6-1189P-201ENST00000383958 107 ntBASIC3.49□□□□□ -1.85
THBS1P07996 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
THBS1P07996 PTMAP2-201ENST00000397627 327 ntBASIC3.49□□□□□ -1.85
THBS1P07996 SNORA19.1-201ENST00000410656 129 ntBASIC3.49□□□□□ -1.85
THBS1P07996 SNORA71B-202ENST00000439232 272 ntBASIC3.49□□□□□ -1.85
THBS1P07996 RPS29P7-201ENST00000439662 171 ntBASIC3.49□□□□□ -1.85
THBS1P07996 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.49□□□□□ -1.85
THBS1P07996 AL133547.1-201ENST00000448546 220 ntBASIC3.49□□□□□ -1.85
THBS1P07996 RNA5SP208-201ENST00000516156 78 ntBASIC3.49□□□□□ -1.85
THBS1P07996 RNA5SP490-201ENST00000517141 136 ntBASIC3.49□□□□□ -1.85
THBS1P07996 RNU1-45P-201ENST00000517191 141 ntBASIC3.49□□□□□ -1.85
THBS1P07996 DEFB131E-201ENST00000532329 154 ntBASIC3.49□□□□□ -1.85
THBS1P07996 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.49□□□□□ -1.85
THBS1P07996 MIR4778-201ENST00000577635 80 ntBASIC3.49□□□□□ -1.85
THBS1P07996 AC007229.1-201ENST00000590455 412 ntBASIC3.49□□□□□ -1.85
THBS1P07996 AC073413.2-201ENST00000604332 360 ntBASIC3.49□□□□□ -1.85
THBS1P07996 SNORA62.6-201ENST00000606322 83 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms