Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC091178.2-201ENST00000584401 117 ntBASIC0.09□□□□□ -2.4
CTSDP07339 AC016597.2-201ENST00000613256 341 ntBASIC0.09□□□□□ -2.4
CTSDP07339 uc_338.34-201ENST00000617467 174 ntBASIC0.09□□□□□ -2.4
CTSDP07339 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.08□□□□□ -2.4
CTSDP07339 SNORA25.3-201ENST00000363205 127 ntBASIC0.08□□□□□ -2.4
CTSDP07339 RNU4-28P-201ENST00000364739 141 ntBASIC0.08□□□□□ -2.4
CTSDP07339 Y_RNA.415-201ENST00000384012 112 ntBASIC0.08□□□□□ -2.4
CTSDP07339 RNU6-1297P-201ENST00000384415 104 ntBASIC0.08□□□□□ -2.4
CTSDP07339 MIR521-1-201ENST00000384902 87 ntBASIC0.08□□□□□ -2.4
CTSDP07339 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.08□□□□□ -2.4
CTSDP07339 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.08□□□□□ -2.4
CTSDP07339 MTND4P18-201ENST00000447010 465 ntBASIC0.08□□□□□ -2.4
CTSDP07339 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.08□□□□□ -2.4
CTSDP07339 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.08□□□□□ -2.4
CTSDP07339 CCDC34P1-201ENST00000507441 517 ntBASIC0.08□□□□□ -2.4
CTSDP07339 AC104383.1-201ENST00000530297 370 ntBASIC0.08□□□□□ -2.4
CTSDP07339 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.08□□□□□ -2.4
CTSDP07339 AC011712.1-201ENST00000588959 234 ntBASIC0.08□□□□□ -2.4
CTSDP07339 AC008536.2-201ENST00000607284 349 ntBASIC0.08□□□□□ -2.4
CTSDP07339 AC068137.4-201ENST00000638485 296 ntBASIC0.08□□□□□ -2.4
CTSDP07339 AC073544.1-201ENST00000600110 1595 ntBASIC0.07□□□□□ -2.4
CTSDP07339 RNU6-1120P-201ENST00000362988 108 ntBASIC0.07□□□□□ -2.4
CTSDP07339 MIR613-201ENST00000385248 95 ntBASIC0.07□□□□□ -2.4
CTSDP07339 BX295541.1-201ENST00000417774 250 ntBASIC0.07□□□□□ -2.4
CTSDP07339 ZNF885P-201ENST00000420174 1098 ntBASIC0.07□□□□□ -2.4
CTSDP07339 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.07□□□□□ -2.4
CTSDP07339 SNORD42A-201ENST00000459584 64 ntBASIC0.07□□□□□ -2.4
CTSDP07339 CYCTP-201ENST00000504253 315 ntBASIC0.07□□□□□ -2.4
CTSDP07339 RNU6-189P-201ENST00000516120 101 ntBASIC0.07□□□□□ -2.4
CTSDP07339 RN7SKP164-201ENST00000516138 266 ntBASIC0.07□□□□□ -2.4
CTSDP07339 MRPS36P3-201ENST00000519284 130 ntBASIC0.07□□□□□ -2.4
CTSDP07339 CPDP1-201ENST00000579660 283 ntBASIC0.07□□□□□ -2.4
CTSDP07339 AC008133.2-201ENST00000624540 351 ntBASIC0.07□□□□□ -2.4
CTSDP07339 AL008636.1-201ENST00000625038 1018 ntBASIC0.07□□□□□ -2.4
CTSDP07339 AC027279.3-201ENST00000625055 122 ntBASIC0.07□□□□□ -2.4
CTSDP07339 MTND4P12-201ENST00000498999 1377 ntBASIC0.06□□□□□ -2.4
CTSDP07339 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
CTSDP07339 RNU6-727P-201ENST00000363592 107 ntBASIC0.06□□□□□ -2.4
CTSDP07339 RNA5SP48-201ENST00000363969 126 ntBASIC0.06□□□□□ -2.4
CTSDP07339 RNU6-297P-201ENST00000384636 107 ntBASIC0.06□□□□□ -2.4
CTSDP07339 MIR193B-201ENST00000384907 83 ntBASIC0.06□□□□□ -2.4
CTSDP07339 MIR520C-201ENST00000385005 87 ntBASIC0.06□□□□□ -2.4
CTSDP07339 MIR452-201ENST00000385020 85 ntBASIC0.06□□□□□ -2.4
CTSDP07339 RNU6-325P-201ENST00000411132 105 ntBASIC0.06□□□□□ -2.4
CTSDP07339 MTCYBP8-201ENST00000422855 651 ntBASIC0.06□□□□□ -2.4
CTSDP07339 SNORD11.1-201ENST00000459482 85 ntBASIC0.06□□□□□ -2.4
CTSDP07339 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.06□□□□□ -2.4
CTSDP07339 RNU11-2P-201ENST00000516898 142 ntBASIC0.06□□□□□ -2.4
CTSDP07339 RNU6-1116P-201ENST00000517269 99 ntBASIC0.06□□□□□ -2.4
CTSDP07339 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.06□□□□□ -2.4
CTSDP07339 AL157687.1-201ENST00000554853 619 ntBASIC0.06□□□□□ -2.4
CTSDP07339 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.06□□□□□ -2.4
CTSDP07339 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.06□□□□□ -2.4
CTSDP07339 MIR4300-201ENST00000581016 96 ntBASIC0.06□□□□□ -2.4
CTSDP07339 AC100812.1-201ENST00000607622 580 ntBASIC0.06□□□□□ -2.4
CTSDP07339 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
CTSDP07339 MIR1-1-201ENST00000362147 71 ntBASIC0.05□□□□□ -2.4
CTSDP07339 Y_RNA.112-201ENST00000363250 102 ntBASIC0.05□□□□□ -2.4
CTSDP07339 RNU6-873P-201ENST00000363833 107 ntBASIC0.05□□□□□ -2.4
CTSDP07339 Y_RNA.184-201ENST00000363884 108 ntBASIC0.05□□□□□ -2.4
CTSDP07339 SNORD115-32-201ENST00000364079 82 ntBASIC0.05□□□□□ -2.4
CTSDP07339 RNU4-67P-201ENST00000364569 141 ntBASIC0.05□□□□□ -2.4
CTSDP07339 SNORD113.3-201ENST00000364630 78 ntBASIC0.05□□□□□ -2.4
CTSDP07339 Y_RNA.319-201ENST00000365138 92 ntBASIC0.05□□□□□ -2.4
CTSDP07339 RNU6-933P-201ENST00000384424 107 ntBASIC0.05□□□□□ -2.4
CTSDP07339 HSFY5P-201ENST00000453726 309 ntBASIC0.05□□□□□ -2.4
CTSDP07339 MTCO3P38-201ENST00000468910 766 ntBASIC0.05□□□□□ -2.4
CTSDP07339 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
CTSDP07339 RNU7-41P-201ENST00000515917 61 ntBASIC0.05□□□□□ -2.4
CTSDP07339 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
CTSDP07339 SNORA74.3-201ENST00000517108 154 ntBASIC0.05□□□□□ -2.4
CTSDP07339 AL358944.1-201ENST00000528537 144 ntBASIC0.05□□□□□ -2.4
CTSDP07339 AC090616.2-202ENST00000584248 222 ntBASIC0.05□□□□□ -2.4
CTSDP07339 AC120024.3-201ENST00000603167 156 ntBASIC0.05□□□□□ -2.4
CTSDP07339 AC007684.1-201ENST00000609671 477 ntBASIC0.05□□□□□ -2.4
CTSDP07339 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.05□□□□□ -2.4
CTSDP07339 Y_RNA.36-201ENST00000362602 112 ntBASIC0.04□□□□□ -2.4
CTSDP07339 RNU5F-3P-201ENST00000363767 117 ntBASIC0.04□□□□□ -2.4
CTSDP07339 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
CTSDP07339 Y_RNA.560-201ENST00000384689 102 ntBASIC0.04□□□□□ -2.4
CTSDP07339 RNU6-376P-201ENST00000384731 106 ntBASIC0.04□□□□□ -2.4
CTSDP07339 MIR573-201ENST00000384964 99 ntBASIC0.04□□□□□ -2.4
CTSDP07339 MIR32-201ENST00000384965 70 ntBASIC0.04□□□□□ -2.4
CTSDP07339 RNU6-248P-201ENST00000410720 107 ntBASIC0.04□□□□□ -2.4
CTSDP07339 MTATP6P18-201ENST00000417994 673 ntBASIC0.04□□□□□ -2.4
CTSDP07339 Z98949.2-201ENST00000440996 144 ntBASIC0.04□□□□□ -2.4
CTSDP07339 AL359672.1-201ENST00000442302 409 ntBASIC0.04□□□□□ -2.4
CTSDP07339 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.04□□□□□ -2.4
CTSDP07339 RNU7-63P-201ENST00000459054 62 ntBASIC0.04□□□□□ -2.4
CTSDP07339 AC091179.3-201ENST00000474761 144 ntBASIC0.04□□□□□ -2.4
CTSDP07339 MTCO1P29-201ENST00000496868 288 ntBASIC0.04□□□□□ -2.4
CTSDP07339 AC107401.1-201ENST00000503426 685 ntBASIC0.04□□□□□ -2.4
CTSDP07339 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.04□□□□□ -2.4
CTSDP07339 AC074133.1-201ENST00000515696 183 ntBASIC0.04□□□□□ -2.4
CTSDP07339 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.04□□□□□ -2.4
CTSDP07339 RNU6-1291P-201ENST00000516591 104 ntBASIC0.04□□□□□ -2.4
CTSDP07339 AC104695.3-201ENST00000604052 296 ntBASIC0.04□□□□□ -2.4
CTSDP07339 AC103705.1-201ENST00000619013 241 ntBASIC0.04□□□□□ -2.4
CTSDP07339 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
CTSDP07339 RNU6-222P-201ENST00000362438 107 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms