Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AL359672.1-201ENST00000442302 409 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 MTND4P18-201ENST00000447010 465 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 RPS20P10-201ENST00000451209 253 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 HSFY5P-201ENST00000453726 309 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 MTCO3P38-201ENST00000468910 766 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 RNU6-759P-201ENST00000516740 103 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 RNU6-1116P-201ENST00000517269 99 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 AP002004.2-201ENST00000531656 154 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 MIR5692C1-201ENST00000585309 91 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 AL357078.3-201ENST00000607528 618 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 PVT1_3.1-201ENST00000620853 95 ntBASIC0.22□□□□□ -2.37
HLA-DQB2P05538 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
HLA-DQB2P05538 AL390237.1-201ENST00000404226 1415 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 SNORD50.1-201ENST00000362987 71 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 Y_RNA.201-201ENST00000364052 96 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 SNORD115-32-201ENST00000364079 82 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 RNU6-1297P-201ENST00000384415 104 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AL606923.1-201ENST00000406616 190 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AL358934.1-201ENST00000432346 324 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC079354.2-201ENST00000453523 154 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC067940.1-201ENST00000458411 300 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 RNU7-63P-201ENST00000459054 62 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC091179.3-201ENST00000474761 144 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC010598.1-201ENST00000510378 103 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC092436.3-201ENST00000511788 257 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 RNU6-1038P-201ENST00000516516 104 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 RNU7-172P-201ENST00000517125 64 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.21□□□□□ -2.38
HLA-DQB2P05538 AC009094.1-201ENST00000564443 426 ntBASIC0.21□□□□□ -2.38
HLA-DQB2P05538 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
HLA-DQB2P05538 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RNU6-833P-201ENST00000363486 107 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RNU6-873P-201ENST00000363833 107 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RNU6-82P-201ENST00000363970 107 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RNY3P9-201ENST00000384727 106 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 MIR32-201ENST00000384965 70 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RNU6-994P-201ENST00000410507 111 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.2□□□□□ -2.38
HLA-DQB2P05538 TPTE2P5-203ENST00000458118 728 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.2□□□□□ -2.38
HLA-DQB2P05538 MTCO1P29-201ENST00000496868 288 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RN7SKP164-201ENST00000516138 266 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RNU6-1291P-201ENST00000516591 104 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 RNU6-1198P-201ENST00000516904 67 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AC104383.1-201ENST00000530297 370 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 MIR3913-1-201ENST00000577744 102 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AC087683.1-201ENST00000591187 441 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AC245884.10-201ENST00000597355 337 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AL121757.2-201ENST00000611223 313 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AL136317.1-201ENST00000612653 226 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AL158209.2-201ENST00000619266 216 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 AL008636.1-201ENST00000625038 1018 ntBASIC0.2□□□□□ -2.38
HLA-DQB2P05538 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HLA-DQB2P05538 SNORD114-23-201ENST00000363536 72 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 Y_RNA.319-201ENST00000365138 92 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 RNU6-933P-201ENST00000384424 107 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 RNU6-1105P-201ENST00000384774 107 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.19□□□□□ -2.38
HLA-DQB2P05538 Z82188.1-201ENST00000436709 154 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 MTCO2P16-201ENST00000436962 677 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AL031667.1-201ENST00000440222 725 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 MTND2P39-201ENST00000457230 764 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC107401.1-201ENST00000503426 685 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC036111.3-201ENST00000526389 112 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.19□□□□□ -2.38
HLA-DQB2P05538 RPL21P9-201ENST00000556149 474 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC092747.3-201ENST00000603769 301 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC005014.3-201ENST00000605985 190 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC068137.4-201ENST00000638485 296 ntBASIC0.19□□□□□ -2.38
HLA-DQB2P05538 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
HLA-DQB2P05538 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 MIR140-201ENST00000385282 100 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
HLA-DQB2P05538 MIR891A-201ENST00000401237 79 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 AL590002.1-201ENST00000406554 418 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 RNU6-177P-201ENST00000411257 104 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 MTND2P18-201ENST00000419962 1030 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 ZNF885P-201ENST00000420174 1098 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 MRPS10P2-201ENST00000431226 381 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 Z98949.2-201ENST00000440996 144 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 AC060788.1-201ENST00000521318 469 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 AL118558.2-201ENST00000556294 238 ntBASIC0.18□□□□□ -2.38
HLA-DQB2P05538 RNU4-9P-201ENST00000364951 139 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 RNU6-793P-201ENST00000384233 104 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 RNU6-342P-201ENST00000384521 104 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 RNY3P10-201ENST00000384764 102 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 MIR216A-201ENST00000385063 110 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 SNORD105-201ENST00000386910 85 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 RNU6-1158P-201ENST00000391167 107 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 SNORD111-201ENST00000408139 94 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 MIR1827-201ENST00000408549 66 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 RNU5A-5P-201ENST00000411054 116 ntBASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.17□□□□□ -2.38
HLA-DQB2P05538 AC091144.1-201ENST00000519573 138 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms