Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.86□□□□□ -2.55
APOBP04114 DEFB131E-201ENST00000532329 154 ntBASIC-0.86□□□□□ -2.55
APOBP04114 MIR3923-201ENST00000579521 83 ntBASIC-0.86□□□□□ -2.55
APOBP04114 DEFB131E-202ENST00000602581 683 ntBASIC-0.86□□□□□ -2.55
APOBP04114 OR4H6P-202ENST00000603819 340 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AL096861.1-201ENST00000610899 123 ntBASIC-0.86□□□□□ -2.55
APOBP04114 MIR340-201ENST00000362125 95 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU6-78P-201ENST00000362897 107 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU6-359P-201ENST00000365466 108 ntBASIC-0.86□□□□□ -2.55
APOBP04114 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU6-364P-201ENST00000384387 107 ntBASIC-0.86□□□□□ -2.55
APOBP04114 MIR526A1-201ENST00000384897 85 ntBASIC-0.86□□□□□ -2.55
APOBP04114 MIR1302-7-201ENST00000408841 72 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AC011352.1-201ENST00000512300 793 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-0.86□□□□□ -2.55
APOBP04114 MIR3192-201ENST00000584920 77 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AL353803.5-201ENST00000599815 141 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.86□□□□□ -2.55
APOBP04114 ZNF204P-201ENST00000416749 2397 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU6-619P-201ENST00000365146 108 ntBASIC-0.86□□□□□ -2.55
APOBP04114 RNU6-396P-201ENST00000365369 105 ntBASIC-0.86□□□□□ -2.55
APOBP04114 SNORD14.1-201ENST00000365609 90 ntBASIC-0.86□□□□□ -2.55
APOBP04114 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.86□□□□□ -2.55
APOBP04114 MIR548H1-201ENST00000408610 102 ntBASIC-0.86□□□□□ -2.55
APOBP04114 BTBD7P2-201ENST00000441962 620 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.86□□□□□ -2.55
APOBP04114 AC020550.1-201ENST00000447385 163 ntBASIC-0.86□□□□□ -2.55
APOBP04114 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.86□□□□□ -2.55
APOBP04114 AC110760.3-201ENST00000598794 467 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AP001033.2-201ENST00000609701 1003 ntBASIC-0.86□□□□□ -2.55
APOBP04114 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.86□□□□□ -2.55
APOBP04114 CDR1-202ENST00000625883 1485 ntBASIC-0.86□□□□□ -2.55
APOBP04114 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.86□□□□□ -2.55
APOBP04114 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.86□□□□□ -2.55
APOBP04114 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
APOBP04114 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.86□□□□□ -2.55
APOBP04114 RNU6-572P-201ENST00000516724 80 ntBASIC-0.86□□□□□ -2.55
APOBP04114 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.87□□□□□ -2.55
APOBP04114 RPS3AP3-201ENST00000411933 242 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AC095057.3-201ENST00000567102 1157 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AC005562.2-201ENST00000618264 111 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AP003072.5-201ENST00000623872 773 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AC092608.3-201ENST00000625017 386 ntBASIC-0.87□□□□□ -2.55
APOBP04114 MIR382-201ENST00000637119 76 ntBASIC-0.87□□□□□ -2.55
APOBP04114 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.87□□□□□ -2.55
APOBP04114 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AC002542.1-201ENST00000440683 193 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.87□□□□□ -2.55
APOBP04114 MIR4639-201ENST00000584938 69 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AP000753.3-201ENST00000604083 169 ntBASIC-0.87□□□□□ -2.55
APOBP04114 SNORA1-201ENST00000384107 130 ntBASIC-0.87□□□□□ -2.55
APOBP04114 RNA5SP86-201ENST00000390869 98 ntBASIC-0.87□□□□□ -2.55
APOBP04114 SNORA12.2-201ENST00000391040 156 ntBASIC-0.87□□□□□ -2.55
APOBP04114 MTND4P25-201ENST00000441039 533 ntBASIC-0.87□□□□□ -2.55
APOBP04114 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.87□□□□□ -2.55
APOBP04114 SNORA18.4-201ENST00000516440 124 ntBASIC-0.87□□□□□ -2.55
APOBP04114 RNU4-66P-201ENST00000365199 138 ntBASIC-0.88□□□□□ -2.55
APOBP04114 SNORA36A-201ENST00000384221 132 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AC079395.1-201ENST00000510981 262 ntBASIC-0.88□□□□□ -2.55
APOBP04114 RNU6-63P-201ENST00000516690 95 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AC022784.5-201ENST00000522241 437 ntBASIC-0.88□□□□□ -2.55
APOBP04114 MIR1273C-201ENST00000578669 77 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AC078795.2-201ENST00000602835 1252 ntBASIC-0.88□□□□□ -2.55
APOBP04114 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.88□□□□□ -2.55
APOBP04114 RNU6-187P-201ENST00000384139 106 ntBASIC-0.88□□□□□ -2.55
APOBP04114 RNU6-417P-201ENST00000384712 107 ntBASIC-0.88□□□□□ -2.55
APOBP04114 MRPL42P3-201ENST00000401492 326 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AC010154.1-201ENST00000425857 269 ntBASIC-0.88□□□□□ -2.55
APOBP04114 DPRXP1-201ENST00000426312 460 ntBASIC-0.88□□□□□ -2.55
APOBP04114 USP9YP16-201ENST00000430287 407 ntBASIC-0.88□□□□□ -2.55
APOBP04114 RNU6-118P-201ENST00000516552 102 ntBASIC-0.88□□□□□ -2.55
APOBP04114 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.88□□□□□ -2.55
APOBP04114 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.88□□□□□ -2.55
APOBP04114 MT-TM-201ENST00000387377 68 ntBASIC-0.88□□□□□ -2.55
APOBP04114 USP9YP28-201ENST00000435142 589 ntBASIC-0.88□□□□□ -2.55
APOBP04114 RNU7-62P-201ENST00000458856 62 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AC023538.1-201ENST00000534576 736 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AC131235.4-201ENST00000609288 620 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AL355143.1-201ENST00000407101 841 ntBASIC-0.88□□□□□ -2.55
APOBP04114 RNU6-479P-201ENST00000516348 105 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AL157687.1-201ENST00000554853 619 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AGGF1P4-201ENST00000568249 801 ntBASIC-0.88□□□□□ -2.55
APOBP04114 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.88□□□□□ -2.55
APOBP04114 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
APOBP04114 AL596211.1-201ENST00000569873 2277 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-395P-201ENST00000365662 106 ntBASIC-0.89□□□□□ -2.55
APOBP04114 SNORD64-201ENST00000386683 67 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-0.89□□□□□ -2.55
APOBP04114 RNU7-41P-201ENST00000515917 61 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AC121247.2-201ENST00000604776 136 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AC079610.2-201ENST00000604818 690 ntBASIC-0.89□□□□□ -2.55
APOBP04114 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.89□□□□□ -2.55
APOBP04114 AC005332.6-201ENST00000613178 446 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-28P-201ENST00000362378 107 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-580P-201ENST00000365159 107 ntBASIC-0.89□□□□□ -2.55
APOBP04114 MT-TN-201ENST00000387400 73 ntBASIC-0.89□□□□□ -2.55
APOBP04114 RNU6-440P-201ENST00000390882 105 ntBASIC-0.89□□□□□ -2.55
APOBP04114 MIR1305-201ENST00000408300 86 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms