Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.466-201ENST00000384294 113 ntBASIC0.04□□□□□ -2.4
APOEP02649 MIR620-201ENST00000385232 95 ntBASIC0.04□□□□□ -2.4
APOEP02649 SNORA40.3-201ENST00000390964 122 ntBASIC0.04□□□□□ -2.4
APOEP02649 AL049545.1-201ENST00000401856 572 ntBASIC0.04□□□□□ -2.4
APOEP02649 AC005534.2-201ENST00000431047 433 ntBASIC0.04□□□□□ -2.4
APOEP02649 SNRPGP12-201ENST00000449481 213 ntBASIC0.04□□□□□ -2.4
APOEP02649 CYCTP-201ENST00000504253 315 ntBASIC0.04□□□□□ -2.4
APOEP02649 CCDC34P1-201ENST00000507441 517 ntBASIC0.04□□□□□ -2.4
APOEP02649 RNA5SP54-201ENST00000516951 92 ntBASIC0.04□□□□□ -2.4
APOEP02649 AC100812.1-201ENST00000607622 580 ntBASIC0.04□□□□□ -2.4
APOEP02649 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.04□□□□□ -2.4
APOEP02649 RNU6-654P-201ENST00000364373 107 ntBASIC0.03□□□□□ -2.4
APOEP02649 RNU6-716P-201ENST00000365621 103 ntBASIC0.03□□□□□ -2.4
APOEP02649 BX295541.1-201ENST00000417774 250 ntBASIC0.03□□□□□ -2.4
APOEP02649 PIGPP3-201ENST00000425307 415 ntBASIC0.03□□□□□ -2.4
APOEP02649 MTCO3P10-201ENST00000455912 772 ntBASIC0.03□□□□□ -2.4
APOEP02649 SNORA14.1-201ENST00000516113 141 ntBASIC0.03□□□□□ -2.4
APOEP02649 AC023442.1-201ENST00000531247 422 ntBASIC0.03□□□□□ -2.4
APOEP02649 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.03□□□□□ -2.4
APOEP02649 RPL21P9-201ENST00000556149 474 ntBASIC0.03□□□□□ -2.4
APOEP02649 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.03□□□□□ -2.4
APOEP02649 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.03□□□□□ -2.4
APOEP02649 AL162730.1-201ENST00000605734 292 ntBASIC0.03□□□□□ -2.4
APOEP02649 AP001506.1-201ENST00000615444 211 ntBASIC0.03□□□□□ -2.4
APOEP02649 MIR6779-201ENST00000617283 64 ntBASIC0.03□□□□□ -2.4
APOEP02649 AC009161.2-201ENST00000624626 138 ntBASIC0.03□□□□□ -2.4
APOEP02649 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.03□□□□□ -2.4
APOEP02649 MTND4P12-201ENST00000498999 1377 ntBASIC0.03□□□□□ -2.4
APOEP02649 MIR1-1-201ENST00000362147 71 ntBASIC0.02□□□□□ -2.41
APOEP02649 SNORD44.1-201ENST00000363202 61 ntBASIC0.02□□□□□ -2.41
APOEP02649 RNU6-181P-201ENST00000363225 107 ntBASIC0.02□□□□□ -2.41
APOEP02649 RNA5SP62-201ENST00000363457 110 ntBASIC0.02□□□□□ -2.41
APOEP02649 Y_RNA.258-201ENST00000364613 105 ntBASIC0.02□□□□□ -2.41
APOEP02649 SNORD113.3-201ENST00000364630 78 ntBASIC0.02□□□□□ -2.41
APOEP02649 RNU6-784P-201ENST00000384330 106 ntBASIC0.02□□□□□ -2.41
APOEP02649 MIR521-1-201ENST00000384902 87 ntBASIC0.02□□□□□ -2.41
APOEP02649 MIR573-201ENST00000384964 99 ntBASIC0.02□□□□□ -2.41
APOEP02649 MIR520C-201ENST00000385005 87 ntBASIC0.02□□□□□ -2.41
APOEP02649 RNU6-1304P-201ENST00000411374 106 ntBASIC0.02□□□□□ -2.41
APOEP02649 MTCO3P19-201ENST00000415864 321 ntBASIC0.02□□□□□ -2.41
APOEP02649 MTND4P18-201ENST00000447010 465 ntBASIC0.02□□□□□ -2.41
APOEP02649 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.02□□□□□ -2.41
APOEP02649 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.02□□□□□ -2.41
APOEP02649 RNU7-180P-201ENST00000459240 63 ntBASIC0.02□□□□□ -2.41
APOEP02649 RNU6-311P-201ENST00000516224 102 ntBASIC0.02□□□□□ -2.41
APOEP02649 RNU6-445P-201ENST00000516949 107 ntBASIC0.02□□□□□ -2.41
APOEP02649 RNA5SP330-201ENST00000517096 96 ntBASIC0.02□□□□□ -2.41
APOEP02649 AC245014.2-201ENST00000603689 287 ntBASIC0.02□□□□□ -2.41
APOEP02649 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.02□□□□□ -2.41
APOEP02649 AC246785.4-201ENST00000605374 287 ntBASIC0.02□□□□□ -2.41
APOEP02649 AC004223.4-201ENST00000612426 332 ntBASIC0.02□□□□□ -2.41
APOEP02649 HULC.1-201ENST00000612720 240 ntBASIC0.02□□□□□ -2.41
APOEP02649 AC006435.5-201ENST00000624486 112 ntBASIC0.02□□□□□ -2.41
APOEP02649 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.01□□□□□ -2.41
APOEP02649 RNU6-1329P-201ENST00000365664 107 ntBASIC0.01□□□□□ -2.41
APOEP02649 MIR562-201ENST00000384894 95 ntBASIC0.01□□□□□ -2.41
APOEP02649 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.01□□□□□ -2.41
APOEP02649 MTCYBP8-201ENST00000422855 651 ntBASIC0.01□□□□□ -2.41
APOEP02649 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.01□□□□□ -2.41
APOEP02649 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.01□□□□□ -2.41
APOEP02649 AC010598.1-201ENST00000510378 103 ntBASIC0.01□□□□□ -2.41
APOEP02649 LARP7P1-201ENST00000605576 316 ntBASIC0.01□□□□□ -2.41
APOEP02649 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
APOEP02649 AC121333.1-201ENST00000567488 2709 ntBASIC0□□□□□ -2.41
APOEP02649 MIR18A-201ENST00000362310 71 ntBASIC0□□□□□ -2.41
APOEP02649 RNU6-873P-201ENST00000363833 107 ntBASIC0□□□□□ -2.41
APOEP02649 SNORD115-8-201ENST00000363856 82 ntBASIC0□□□□□ -2.41
APOEP02649 SNORD115-38-201ENST00000365037 82 ntBASIC0□□□□□ -2.41
APOEP02649 MIR32-201ENST00000384965 70 ntBASIC0□□□□□ -2.41
APOEP02649 RNA5SP63-201ENST00000391225 112 ntBASIC0□□□□□ -2.41
APOEP02649 MIR1197-201ENST00000408818 88 ntBASIC0□□□□□ -2.41
APOEP02649 RNA5SP95-201ENST00000410319 137 ntBASIC0□□□□□ -2.41
APOEP02649 RNU6-325P-201ENST00000411132 105 ntBASIC0□□□□□ -2.41
APOEP02649 AC133104.1-201ENST00000429100 218 ntBASIC0□□□□□ -2.41
APOEP02649 AL033528.1-201ENST00000453780 140 ntBASIC0□□□□□ -2.41
APOEP02649 AC091179.3-201ENST00000474761 144 ntBASIC0□□□□□ -2.41
APOEP02649 NDUFA4P2-201ENST00000489989 244 ntBASIC0□□□□□ -2.41
APOEP02649 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0□□□□□ -2.41
APOEP02649 RNU4-77P-201ENST00000516692 156 ntBASIC0□□□□□ -2.41
APOEP02649 MTND1P8-201ENST00000571424 950 ntBASIC0□□□□□ -2.41
APOEP02649 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0□□□□□ -2.41
APOEP02649 AC120024.3-201ENST00000603167 156 ntBASIC0□□□□□ -2.41
APOEP02649 MIR8076-201ENST00000611401 83 ntBASIC0□□□□□ -2.41
APOEP02649 AC015726.2-201ENST00000620112 122 ntBASIC0□□□□□ -2.41
APOEP02649 AC092634.7-201ENST00000621022 103 ntBASIC0□□□□□ -2.41
APOEP02649 AP002371.2-201ENST00000624450 503 ntBASIC0□□□□□ -2.41
APOEP02649 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.01□□□□□ -2.41
APOEP02649 RNU6-517P-201ENST00000384362 110 ntBASIC-0.01□□□□□ -2.41
APOEP02649 SNORA2B-201ENST00000384583 137 ntBASIC-0.01□□□□□ -2.41
APOEP02649 RNU6-297P-201ENST00000384636 107 ntBASIC-0.01□□□□□ -2.41
APOEP02649 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.01□□□□□ -2.41
APOEP02649 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOEP02649 HSFY5P-201ENST00000453726 309 ntBASIC-0.01□□□□□ -2.41
APOEP02649 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOEP02649 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.01□□□□□ -2.41
APOEP02649 AC074133.1-201ENST00000515696 183 ntBASIC-0.01□□□□□ -2.41
APOEP02649 SNORA18.6-201ENST00000516792 115 ntBASIC-0.01□□□□□ -2.41
APOEP02649 SNORA74.3-201ENST00000517108 154 ntBASIC-0.01□□□□□ -2.41
APOEP02649 AC091144.1-201ENST00000519573 138 ntBASIC-0.01□□□□□ -2.41
APOEP02649 AC010620.1-201ENST00000601088 1102 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms