Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNA5SP291-201ENST00000517222 105 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.02□□□□□ -2.09
COL2A1P02458 TRAV28-201ENST00000557548 323 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 MIR4446-201ENST00000578505 67 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 AC006001.4-201ENST00000622243 395 ntBASIC2.02□□□□□ -2.09
COL2A1P02458 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
COL2A1P02458 RNU6-1175P-201ENST00000365200 107 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-1286P-201ENST00000383871 107 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-281P-201ENST00000384212 103 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-1289P-201ENST00000384431 106 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 MIR10B-201ENST00000385011 110 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 MIR518D-201ENST00000385014 87 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 SNORA53-201ENST00000391141 249 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-1197P-201ENST00000391183 107 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.01□□□□□ -2.09
COL2A1P02458 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.01□□□□□ -2.09
COL2A1P02458 AL358075.3-201ENST00000426289 226 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.01□□□□□ -2.09
COL2A1P02458 RNU7-120P-201ENST00000459334 63 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 Y_RNA.700-201ENST00000516806 100 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 Y_RNA.703-201ENST00000516846 111 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.01□□□□□ -2.09
COL2A1P02458 HSPE1P4-201ENST00000550617 308 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AL391261.3-201ENST00000557194 520 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 MIR3921-201ENST00000577308 85 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AL512598.1-201ENST00000610158 273 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 SNORA43.4-201ENST00000629559 138 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 SDAD1P2-201ENST00000441308 2028 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.01□□□□□ -2.09
COL2A1P02458 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-727P-201ENST00000363592 107 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-818P-201ENST00000364837 108 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 Y_RNA.327-201ENST00000365201 102 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 RNA5SP240-201ENST00000365355 128 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 Y_RNA.398-201ENST00000383952 99 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 Y_RNA.464-201ENST00000384282 110 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 MIR329-1-201ENST00000385028 80 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
COL2A1P02458 RNU2-61P-201ENST00000411069 191 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.01□□□□□ -2.09
COL2A1P02458 GPM6BP3-201ENST00000442797 145 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-567P-201ENST00000516746 107 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 RNU6-58P-201ENST00000517143 103 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.01□□□□□ -2.09
COL2A1P02458 AL162424.1-201ENST00000602325 221 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 SNORD113-5-201ENST00000607261 78 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AC004832.4-201ENST00000608952 331 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 FTX_3.1-201ENST00000610451 147 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AL590240.4-201ENST00000616908 390 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 AC132825.6-201ENST00000638861 357 ntBASIC2.01□□□□□ -2.09
COL2A1P02458 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
COL2A1P02458 AC002546.1-201ENST00000588041 2504 ntBASIC2□□□□□ -2.09
COL2A1P02458 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL2A1P02458 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COL2A1P02458 RNU6-1020P-201ENST00000363684 107 ntBASIC2□□□□□ -2.09
COL2A1P02458 RNU6-1280P-201ENST00000365211 107 ntBASIC2□□□□□ -2.09
COL2A1P02458 Y_RNA.331-201ENST00000365267 102 ntBASIC2□□□□□ -2.09
COL2A1P02458 Y_RNA.383-201ENST00000383855 97 ntBASIC2□□□□□ -2.09
COL2A1P02458 RNU6-741P-201ENST00000383889 107 ntBASIC2□□□□□ -2.09
COL2A1P02458 SNORD63-201ENST00000384262 68 ntBASIC2□□□□□ -2.09
COL2A1P02458 MIR153-2-201ENST00000385225 87 ntBASIC2□□□□□ -2.09
COL2A1P02458 MIR548I2-201ENST00000408348 149 ntBASIC2□□□□□ -2.09
COL2A1P02458 RNU6-1245P-201ENST00000411130 106 ntBASIC2□□□□□ -2.09
COL2A1P02458 AC074117.2-201ENST00000417130 397 ntBASIC2□□□□□ -2.09
COL2A1P02458 AC092047.1-201ENST00000424997 240 ntBASIC2□□□□□ -2.09
COL2A1P02458 AL512844.2-201ENST00000433990 593 ntBASIC2□□□□□ -2.09
COL2A1P02458 RPS15AP5-201ENST00000436276 388 ntBASIC2□□□□□ -2.09
COL2A1P02458 RNU1-123P-201ENST00000458950 160 ntBASIC2□□□□□ -2.09
COL2A1P02458 RPL26P26-201ENST00000480251 434 ntBASIC2□□□□□ -2.09
COL2A1P02458 AC091959.1-201ENST00000495857 238 ntBASIC2□□□□□ -2.09
COL2A1P02458 Y_RNA.662-201ENST00000516028 97 ntBASIC2□□□□□ -2.09
COL2A1P02458 RNU6-1219P-201ENST00000516143 112 ntBASIC2□□□□□ -2.09
COL2A1P02458 RNU6-703P-201ENST00000516946 107 ntBASIC2□□□□□ -2.09
COL2A1P02458 MIR2355-201ENST00000517199 87 ntBASIC2□□□□□ -2.09
COL2A1P02458 MRPS18CP4-201ENST00000535821 231 ntBASIC2□□□□□ -2.09
COL2A1P02458 AC027288.2-201ENST00000553028 243 ntBASIC2□□□□□ -2.09
COL2A1P02458 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2□□□□□ -2.09
COL2A1P02458 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
COL2A1P02458 MIR4452-201ENST00000583004 71 ntBASIC2□□□□□ -2.09
COL2A1P02458 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
COL2A1P02458 MZT1P2-201ENST00000604387 248 ntBASIC2□□□□□ -2.09
COL2A1P02458 AC011921.3-201ENST00000605540 361 ntBASIC2□□□□□ -2.09
COL2A1P02458 MIR6895-201ENST00000613497 78 ntBASIC2□□□□□ -2.09
COL2A1P02458 AL365265.1-201ENST00000621045 234 ntBASIC2□□□□□ -2.09
COL2A1P02458 SCARNA4-201ENST00000629045 128 ntBASIC2□□□□□ -2.09
COL2A1P02458 AC008568.2-201ENST00000623862 2313 ntBASIC2□□□□□ -2.09
COL2A1P02458 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL2A1P02458 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL2A1P02458 SNORA25.1-201ENST00000362326 128 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 SNORD32A-201ENST00000364805 84 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 Y_RNA.319-201ENST00000365138 92 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 RNU6-42P-201ENST00000384165 107 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 RNU6-918P-201ENST00000391219 106 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.99□□□□□ -2.09
COL2A1P02458 RPS4XP11-201ENST00000446897 772 ntBASIC1.99□□□□□ -2.09
COL2A1P02458 AC091021.1-201ENST00000468051 388 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms