Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC010598.1-201ENST00000510378 103 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AP003033.1-201ENST00000527244 415 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AL121579.1-201ENST00000555129 305 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AC019288.1-201ENST00000557918 224 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 MIR4421-201ENST00000578133 69 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AC084782.3-201ENST00000612282 578 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 AL359757.2-201ENST00000624309 274 ntBASIC0.89□□□□□ -2.27
HLA-DQA1P01909 MIR378A-201ENST00000362177 66 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 RNA5SP361-201ENST00000362686 118 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 RNY1P16-201ENST00000363063 111 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.339-201ENST00000365325 102 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 SNORA22-201ENST00000383907 134 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 SNORA20B-201ENST00000384220 132 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 RNU6-1145P-201ENST00000384246 107 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 SNORA22C-201ENST00000384614 134 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HLA-DQA1P01909 RNU4-62P-201ENST00000410125 130 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 MTND3P8-201ENST00000412909 339 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC074085.1-201ENST00000413598 418 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AL353997.1-201ENST00000432936 108 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 PGBD4P5-201ENST00000445958 426 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 MRPS10P1-201ENST00000448483 130 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.88□□□□□ -2.27
HLA-DQA1P01909 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQA1P01909 RPL7P42-201ENST00000481005 679 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AL133373.1-201ENST00000497098 94 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC046134.1-201ENST00000514454 666 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 RNA5SP458-201ENST00000516188 119 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 RNU6-1016P-201ENST00000516689 94 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 APOOP3-201ENST00000536787 586 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC090617.3-201ENST00000573670 475 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC073413.2-201ENST00000604332 360 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 BNIP3P10-201ENST00000605360 577 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC009229.3-201ENST00000608056 282 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.88□□□□□ -2.27
HLA-DQA1P01909 AC018630.2-201ENST00000534866 2403 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 SNORA7.1-201ENST00000363750 139 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.364-201ENST00000365532 101 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.404-201ENST00000383978 102 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.595-201ENST00000410403 105 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 MTND1P34-201ENST00000438556 671 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 DYNLT3P2-201ENST00000442517 295 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 RPS29P29-201ENST00000456396 171 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 RN7SKP88-201ENST00000516847 250 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 AC105029.1-201ENST00000520250 669 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQA1P01909 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.87□□□□□ -2.27
HLA-DQA1P01909 MIR4295-201ENST00000585286 85 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 7SK.8-201ENST00000612110 250 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 7SK.11-201ENST00000615477 250 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 7SK.13-201ENST00000622040 250 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 AC106754.2-201ENST00000623006 233 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.87□□□□□ -2.27
HLA-DQA1P01909 AC068647.2-201ENST00000637380 353 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 AC068137.4-201ENST00000638485 296 ntBASIC0.87□□□□□ -2.27
HLA-DQA1P01909 MIR618-201ENST00000385287 98 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 RNU6-700P-201ENST00000391043 107 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DQA1P01909 MTND1P4-201ENST00000435196 415 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 UQCRBP2-201ENST00000447827 297 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 MTND3P10-201ENST00000450967 341 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 RNU7-95P-201ENST00000459222 64 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AC092991.1-201ENST00000477176 376 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AC018710.1-201ENST00000506509 158 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 RNU6-358P-201ENST00000516564 75 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 RNU6-165P-201ENST00000517170 99 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 RAB11AP2-201ENST00000545905 639 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 MIR4778-201ENST00000577635 80 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 MIR4769-201ENST00000584126 77 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 AC068790.6-201ENST00000602558 258 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 MIR8065-201ENST00000620577 100 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.86□□□□□ -2.27
HLA-DQA1P01909 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
HLA-DQA1P01909 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.86□□□□□ -2.27
HLA-DQA1P01909 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.88-201ENST00000363029 99 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 RNU1-22P-201ENST00000363334 158 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 RNU6-879P-201ENST00000364328 108 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 Y_RNA.358-201ENST00000365491 99 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 RNU6-601P-201ENST00000384540 107 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 FGF7P8-201ENST00000402994 292 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 MTCYBP10-201ENST00000424905 650 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.85□□□□□ -2.27
HLA-DQA1P01909 STAG3L5P-204ENST00000443759 179 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.85□□□□□ -2.27
HLA-DQA1P01909 PCNPP5-201ENST00000452246 481 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 AC004223.1-201ENST00000479840 271 ntBASIC0.85□□□□□ -2.27
HLA-DQA1P01909 AC097462.1-201ENST00000514125 324 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms