Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 MIR1273D-201ENST00000577266 86 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 AL162730.1-201ENST00000605734 292 ntBASIC1.87□□□□□ -2.11
CLPTM1O96005 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CLPTM1O96005 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
CLPTM1O96005 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 MIR340-201ENST00000362125 95 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 Y_RNA.19-201ENST00000362462 99 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 Y_RNA.64-201ENST00000362845 102 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 Y_RNA.133-201ENST00000363428 110 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 Y_RNA.152-201ENST00000363578 100 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 Y_RNA.332-201ENST00000365271 113 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 RNU6-1264P-201ENST00000383891 107 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 RN7SKP284-201ENST00000411002 343 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 RNU6-57P-201ENST00000411348 103 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 RPL21P38-201ENST00000418090 167 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.86□□□□□ -2.11
CLPTM1O96005 DYNLT3P2-201ENST00000442517 295 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 RNU7-57P-201ENST00000459540 60 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 RNU6-966P-201ENST00000516479 104 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 CYCSP23-201ENST00000519781 313 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.86□□□□□ -2.11
CLPTM1O96005 MIR3945-201ENST00000581853 98 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 AC104984.5-201ENST00000586878 94 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 MIR376A1-201ENST00000616574 68 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 AC130454.1-201ENST00000622948 401 ntBASIC1.86□□□□□ -2.11
CLPTM1O96005 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CLPTM1O96005 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.86□□□□□ -2.11
CLPTM1O96005 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLPTM1O96005 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
CLPTM1O96005 U3.8-201ENST00000363675 217 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 Y_RNA.183-201ENST00000363882 113 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 Y_RNA.222-201ENST00000364264 102 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 RNU6-975P-201ENST00000384296 105 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 SNORA67.3-201ENST00000384366 140 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 RNU4-30P-201ENST00000410245 143 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 SRIP3-201ENST00000413200 219 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 AC123900.1-201ENST00000420390 96 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 MTND3P2-201ENST00000438452 342 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 SCARNA16.3-201ENST00000516595 184 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 RNA5SP137-201ENST00000516833 135 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.85□□□□□ -2.11
CLPTM1O96005 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
CLPTM1O96005 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.85□□□□□ -2.11
CLPTM1O96005 MIR4300-201ENST00000581016 96 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 AC005176.2-201ENST00000596933 147 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 AC004467.1-201ENST00000615678 330 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 MIR3674-201ENST00000636576 68 ntBASIC1.85□□□□□ -2.11
CLPTM1O96005 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 Y_RNA.101-201ENST00000363154 102 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 RNU6-454P-201ENST00000364292 107 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 SNORA72.2-201ENST00000365028 127 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 RNU6-102P-201ENST00000384485 104 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 Y_RNA.574-201ENST00000384766 95 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 RNU6-1109P-201ENST00000391187 107 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 Y_RNA.602-201ENST00000410535 92 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 OOSP1P1-201ENST00000423265 274 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 AC096920.1-201ENST00000423991 241 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 TOMM22P2-201ENST00000430735 237 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
CLPTM1O96005 MTCO1P44-201ENST00000441935 243 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.84□□□□□ -2.11
CLPTM1O96005 LINC01399-202ENST00000458450 244 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 AC114982.1-201ENST00000469402 321 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 AC098869.1-201ENST00000481627 292 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 RPS29P21-201ENST00000496272 170 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLPTM1O96005 Y_RNA.713-201ENST00000517013 96 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.84□□□□□ -2.11
CLPTM1O96005 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.84□□□□□ -2.11
CLPTM1O96005 AL031274.2-201ENST00000599419 203 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
CLPTM1O96005 AL590240.4-201ENST00000616908 390 ntBASIC1.84□□□□□ -2.11
CLPTM1O96005 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.84□□□□□ -2.11
CLPTM1O96005 AP006437.1-201ENST00000641440 3685 ntBASIC1.84□□□□□ -2.12
CLPTM1O96005 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CLPTM1O96005 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.84□□□□□ -2.12
CLPTM1O96005 LINC02555-201ENST00000563933 1951 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 Y_RNA.47-201ENST00000362697 108 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 RNU6-770P-201ENST00000363929 105 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 SNORD114-6-201ENST00000364393 72 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 Y_RNA.276-201ENST00000364732 109 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 RNU6-1175P-201ENST00000365200 107 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 Y_RNA.570-201ENST00000384750 101 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 MIR568-201ENST00000385036 95 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 MIR1185-2-201ENST00000408687 86 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 AL158823.1-201ENST00000418441 478 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 NDUFB4P10-201ENST00000452541 359 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 RNU7-110P-201ENST00000516891 62 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 AP003733.2-201ENST00000529409 171 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 AC026271.5-201ENST00000577873 130 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 MIR4648-201ENST00000580107 72 ntBASIC1.83□□□□□ -2.12
CLPTM1O96005 MIR4423-201ENST00000580922 80 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms