Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 Y_RNA.58-201ENST00000362807 102 ntBASIC1.95□□□□□ -2.1
DDX58O95786 Y_RNA.154-201ENST00000363624 102 ntBASIC1.95□□□□□ -2.1
DDX58O95786 RNY3P1-201ENST00000365085 102 ntBASIC1.95□□□□□ -2.1
DDX58O95786 RNY3-201ENST00000365484 102 ntBASIC1.95□□□□□ -2.1
DDX58O95786 Y_RNA.498-201ENST00000384460 102 ntBASIC1.95□□□□□ -2.1
DDX58O95786 SNORD116-29-201ENST00000384516 83 ntBASIC1.95□□□□□ -2.1
DDX58O95786 AP1B1P2-201ENST00000416196 106 ntBASIC1.95□□□□□ -2.1
DDX58O95786 FTH1P12-201ENST00000432137 551 ntBASIC1.95□□□□□ -2.1
DDX58O95786 AC236972.2-201ENST00000434979 310 ntBASIC1.95□□□□□ -2.1
DDX58O95786 HSPE1P9-201ENST00000440046 311 ntBASIC1.95□□□□□ -2.1
DDX58O95786 MTATP6P23-201ENST00000440153 476 ntBASIC1.95□□□□□ -2.1
DDX58O95786 NDUFB4P10-201ENST00000452541 359 ntBASIC1.95□□□□□ -2.1
DDX58O95786 FGF7P4-201ENST00000509595 295 ntBASIC1.95□□□□□ -2.1
DDX58O95786 AC008834.1-201ENST00000511612 175 ntBASIC1.95□□□□□ -2.1
DDX58O95786 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX58O95786 CYCSP23-201ENST00000519781 313 ntBASIC1.95□□□□□ -2.1
DDX58O95786 AC093027.1-201ENST00000546698 429 ntBASIC1.95□□□□□ -2.1
DDX58O95786 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX58O95786 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
DDX58O95786 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.95□□□□□ -2.1
DDX58O95786 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
DDX58O95786 AC073544.1-201ENST00000600110 1595 ntBASIC1.94□□□□□ -2.1
DDX58O95786 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
DDX58O95786 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
DDX58O95786 RNU6-439P-201ENST00000384188 106 ntBASIC1.94□□□□□ -2.1
DDX58O95786 RNU6-296P-201ENST00000384608 107 ntBASIC1.94□□□□□ -2.1
DDX58O95786 AL117342.1-201ENST00000404861 406 ntBASIC1.94□□□□□ -2.1
DDX58O95786 MIR1267-201ENST00000408723 78 ntBASIC1.94□□□□□ -2.1
DDX58O95786 ELOCP24-201ENST00000456370 334 ntBASIC1.94□□□□□ -2.1
DDX58O95786 RNU6-1053P-201ENST00000515930 101 ntBASIC1.94□□□□□ -2.1
DDX58O95786 Y_RNA.675-201ENST00000516389 149 ntBASIC1.94□□□□□ -2.1
DDX58O95786 RNA5SP481-201ENST00000516814 122 ntBASIC1.94□□□□□ -2.1
DDX58O95786 SNORA31.24-201ENST00000517232 57 ntBASIC1.94□□□□□ -2.1
DDX58O95786 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
DDX58O95786 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
DDX58O95786 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.93□□□□□ -2.1
DDX58O95786 RNU6-490P-201ENST00000362985 107 ntBASIC1.93□□□□□ -2.1
DDX58O95786 RNY3P11-201ENST00000364153 102 ntBASIC1.93□□□□□ -2.1
DDX58O95786 RNU6-1145P-201ENST00000384246 107 ntBASIC1.93□□□□□ -2.1
DDX58O95786 MIR1323-201ENST00000408090 73 ntBASIC1.93□□□□□ -2.1
DDX58O95786 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.93□□□□□ -2.1
DDX58O95786 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.93□□□□□ -2.1
DDX58O95786 PCNPP5-201ENST00000452246 481 ntBASIC1.93□□□□□ -2.1
DDX58O95786 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
DDX58O95786 AC027419.1-201ENST00000522976 328 ntBASIC1.93□□□□□ -2.1
DDX58O95786 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.93□□□□□ -2.1
DDX58O95786 MTND5P10-201ENST00000603719 1809 ntBASIC1.93□□□□□ -2.1
DDX58O95786 Y_RNA.146-201ENST00000363549 102 ntBASIC1.92□□□□□ -2.1
DDX58O95786 MT-TD-201ENST00000387419 68 ntBASIC1.92□□□□□ -2.1
DDX58O95786 RNU6-360P-201ENST00000390944 104 ntBASIC1.92□□□□□ -2.1
DDX58O95786 AC016909.1-201ENST00000415916 166 ntBASIC1.92□□□□□ -2.1
DDX58O95786 AC245047.4-201ENST00000433189 144 ntBASIC1.92□□□□□ -2.1
DDX58O95786 HSPE1P21-201ENST00000438283 308 ntBASIC1.92□□□□□ -2.1
DDX58O95786 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
DDX58O95786 SNORD19B-201ENST00000459623 84 ntBASIC1.92□□□□□ -2.1
DDX58O95786 MTND3P22-201ENST00000510932 243 ntBASIC1.92□□□□□ -2.1
DDX58O95786 RN7SKP49-201ENST00000516675 260 ntBASIC1.92□□□□□ -2.1
DDX58O95786 RNU6-699P-201ENST00000517081 110 ntBASIC1.92□□□□□ -2.1
DDX58O95786 MIR2355-201ENST00000517199 87 ntBASIC1.92□□□□□ -2.1
DDX58O95786 DNAJC19P9-201ENST00000555084 351 ntBASIC1.92□□□□□ -2.1
DDX58O95786 AC015720.1-201ENST00000565251 277 ntBASIC1.92□□□□□ -2.1
DDX58O95786 AC080078.3-201ENST00000605407 463 ntBASIC1.92□□□□□ -2.1
DDX58O95786 RNU4-73P-201ENST00000363164 141 ntBASIC1.91□□□□□ -2.1
DDX58O95786 Y_RNA.187-201ENST00000363918 113 ntBASIC1.91□□□□□ -2.1
DDX58O95786 RNU6-1040P-201ENST00000383974 107 ntBASIC1.91□□□□□ -2.1
DDX58O95786 RNU6-318P-201ENST00000384283 103 ntBASIC1.91□□□□□ -2.1
DDX58O95786 MIR628-201ENST00000385229 95 ntBASIC1.91□□□□□ -2.1
DDX58O95786 RNA5SP467-201ENST00000391274 118 ntBASIC1.91□□□□□ -2.1
DDX58O95786 Y_RNA.592-201ENST00000410274 109 ntBASIC1.91□□□□□ -2.1
DDX58O95786 SNORD12B-201ENST00000410433 91 ntBASIC1.91□□□□□ -2.1
DDX58O95786 COX6CP10-201ENST00000416832 224 ntBASIC1.91□□□□□ -2.1
DDX58O95786 RPL31P63-201ENST00000422565 375 ntBASIC1.91□□□□□ -2.1
DDX58O95786 MRPS18CP6-201ENST00000423587 223 ntBASIC1.91□□□□□ -2.1
DDX58O95786 MTND4P28-201ENST00000426217 387 ntBASIC1.91□□□□□ -2.1
DDX58O95786 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.91□□□□□ -2.1
DDX58O95786 RNU1-142P-201ENST00000516682 145 ntBASIC1.91□□□□□ -2.1
DDX58O95786 AC018448.1-201ENST00000552843 316 ntBASIC1.91□□□□□ -2.1
DDX58O95786 HSBP1P1-201ENST00000555205 166 ntBASIC1.91□□□□□ -2.1
DDX58O95786 MIR4795-201ENST00000584182 89 ntBASIC1.91□□□□□ -2.1
DDX58O95786 AL357075.2-201ENST00000614906 189 ntBASIC1.91□□□□□ -2.1
DDX58O95786 AC087588.2-201ENST00000617667 426 ntBASIC1.91□□□□□ -2.1
DDX58O95786 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
DDX58O95786 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.91□□□□□ -2.1
DDX58O95786 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX58O95786 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
DDX58O95786 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
DDX58O95786 Y_RNA.287-201ENST00000364853 94 ntBASIC1.9□□□□□ -2.11
DDX58O95786 RNU6-926P-201ENST00000384075 107 ntBASIC1.9□□□□□ -2.11
DDX58O95786 RNA5SP475-201ENST00000410568 110 ntBASIC1.9□□□□□ -2.11
DDX58O95786 TOMM22P2-201ENST00000430735 237 ntBASIC1.9□□□□□ -2.11
DDX58O95786 AC099799.1-201ENST00000439809 192 ntBASIC1.9□□□□□ -2.11
DDX58O95786 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.9□□□□□ -2.11
DDX58O95786 AC073910.1-201ENST00000445047 438 ntBASIC1.9□□□□□ -2.11
DDX58O95786 RNU6-625P-201ENST00000459412 107 ntBASIC1.9□□□□□ -2.11
DDX58O95786 AC074133.1-201ENST00000515696 183 ntBASIC1.9□□□□□ -2.11
DDX58O95786 Y_RNA.661-201ENST00000516003 99 ntBASIC1.9□□□□□ -2.11
DDX58O95786 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.9□□□□□ -2.11
DDX58O95786 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.9□□□□□ -2.11
DDX58O95786 AL008636.1-201ENST00000625038 1018 ntBASIC1.9□□□□□ -2.11
DDX58O95786 AP000648.3-201ENST00000623539 4507 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 835.4 ms