Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AP003033.1-201ENST00000527244 415 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 AC004584.2-201ENST00000570407 410 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 U6.73-201ENST00000619194 103 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 AC092794.2-201ENST00000620933 563 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 TPTEP1-208ENST00000636884 213 ntBASIC1.63□□□□□ -2.15
GGPS1O95749 MIR337-201ENST00000362281 93 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 RNY1P10-201ENST00000363268 113 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 RNU6-950P-201ENST00000384651 107 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 RNA5SP109-201ENST00000391010 116 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 RPL21P1-201ENST00000399532 476 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 AL606517.2-201ENST00000442855 241 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 MTND4P17-201ENST00000470444 350 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 RPL17P19-201ENST00000489069 552 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 RNU6-107P-201ENST00000516643 102 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.62□□□□□ -2.15
GGPS1O95749 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
GGPS1O95749 MIR8063-201ENST00000621930 81 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 AC006435.5-201ENST00000624486 112 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 AL669831.3-213ENST00000636676 183 ntBASIC1.62□□□□□ -2.15
GGPS1O95749 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
GGPS1O95749 SNORD81.2-201ENST00000365153 76 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 Y_RNA.327-201ENST00000365201 102 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 RNU6-1264P-201ENST00000383891 107 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 RNU6-1145P-201ENST00000384246 107 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 Y_RNA.557-201ENST00000384680 107 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 RNU4-14P-201ENST00000410858 122 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 AC092423.1-201ENST00000430165 186 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.61□□□□□ -2.15
GGPS1O95749 UQCRBP2-201ENST00000447827 297 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.61□□□□□ -2.15
GGPS1O95749 SNORD65B-201ENST00000459126 73 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 RNU7-34P-201ENST00000459394 64 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 RPS26P55-201ENST00000471178 356 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.61□□□□□ -2.15
GGPS1O95749 RNA5SP445-201ENST00000515889 115 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 Y_RNA.675-201ENST00000516389 149 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.61□□□□□ -2.15
GGPS1O95749 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
GGPS1O95749 RNA5SP361-201ENST00000362686 118 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 SNORD1A-201ENST00000364968 72 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 RNU6-1186P-201ENST00000410429 97 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.6□□□□□ -2.15
GGPS1O95749 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
GGPS1O95749 RPL23AP50-201ENST00000434149 455 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 AC005002.2-201ENST00000438228 269 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 U8.22-201ENST00000459141 133 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 AC074133.1-201ENST00000515696 183 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 RNU7-99P-201ENST00000516271 62 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.6□□□□□ -2.15
GGPS1O95749 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.6□□□□□ -2.15
GGPS1O95749 AC022217.4-201ENST00000604389 163 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.6□□□□□ -2.15
GGPS1O95749 AL357075.2-201ENST00000614906 189 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 AL157834.3-201ENST00000615543 103 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 AC104260.1-201ENST00000616660 539 ntBASIC1.6□□□□□ -2.15
GGPS1O95749 RNU6-879P-201ENST00000364328 108 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 Y_RNA.358-201ENST00000365491 99 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 RNU6-997P-201ENST00000384725 107 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 ELOCP21-201ENST00000412558 336 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 RBMX2P4-201ENST00000441256 376 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 SNRPGP13-201ENST00000442212 177 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.59□□□□□ -2.15
GGPS1O95749 AC010598.1-201ENST00000510378 103 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 RN7SKP49-201ENST00000516675 260 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 RNU6-1213P-201ENST00000517075 94 ntBASIC1.59□□□□□ -2.15
GGPS1O95749 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.59□□□□□ -2.15
GGPS1O95749 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
GGPS1O95749 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
GGPS1O95749 SNORD33-201ENST00000362761 85 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 U8.1-201ENST00000362843 134 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 RNU6-370P-201ENST00000411008 104 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 AC027119.1-201ENST00000440877 241 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 MRPS10P1-201ENST00000448483 130 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.58□□□□□ -2.16
GGPS1O95749 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.58□□□□□ -2.16
GGPS1O95749 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.58□□□□□ -2.16
GGPS1O95749 AC079140.2-201ENST00000506193 142 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 RNU6-902P-201ENST00000517212 91 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 AC022868.1-201ENST00000517767 391 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 MIR3684-201ENST00000579779 74 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 MIR4438-201ENST00000585271 93 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 AL929325.1-201ENST00000603096 117 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 AC099654.14-201ENST00000638599 341 ntBASIC1.58□□□□□ -2.16
GGPS1O95749 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.57□□□□□ -2.16
GGPS1O95749 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.57□□□□□ -2.16
GGPS1O95749 MIR410-201ENST00000362222 80 ntBASIC1.57□□□□□ -2.16
GGPS1O95749 AC098614.3-201ENST00000438957 440 ntBASIC1.57□□□□□ -2.16
GGPS1O95749 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.57□□□□□ -2.16
GGPS1O95749 PCNPP5-201ENST00000452246 481 ntBASIC1.57□□□□□ -2.16
GGPS1O95749 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
GGPS1O95749 PRDX4P1-201ENST00000507189 574 ntBASIC1.57□□□□□ -2.16
GGPS1O95749 SNORA31.10-201ENST00000516482 106 ntBASIC1.57□□□□□ -2.16
GGPS1O95749 SNORA20.3-201ENST00000516880 132 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms