Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AL034345.1-201ENST00000407768 123 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.85□□□□□ -2.27
SEMA3DO95025 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.85□□□□□ -2.27
SEMA3DO95025 Y_RNA.673-201ENST00000516306 88 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 RNU6-107P-201ENST00000516643 102 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 AC134698.4-201ENST00000523451 826 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 MIR4778-201ENST00000577635 80 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 MIR4273-201ENST00000582824 84 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 BX284668.6-201ENST00000606899 438 ntBASIC0.85□□□□□ -2.27
SEMA3DO95025 RNU6-222P-201ENST00000362438 107 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 RNU6-1148P-201ENST00000410992 104 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.84□□□□□ -2.27
SEMA3DO95025 STAG3L5P-204ENST00000443759 179 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 RPS27P22-201ENST00000478056 241 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC010469.2-201ENST00000496412 480 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC093303.1-201ENST00000514549 295 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 RNU7-175P-201ENST00000515915 61 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 RNU6-1088P-201ENST00000516850 104 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.84□□□□□ -2.27
SEMA3DO95025 AC109635.3-201ENST00000529536 185 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 APOOP3-201ENST00000536787 586 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 7SK.7-201ENST00000603504 247 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC010999.1-201ENST00000611856 324 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC073349.3-201ENST00000617616 186 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC048344.4-201ENST00000619744 527 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
SEMA3DO95025 Y_RNA.184-201ENST00000363884 108 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 RNU1-36P-201ENST00000365130 165 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 MIR222-201ENST00000384992 110 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 MIR1276-201ENST00000408707 83 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 MTND3P23-201ENST00000431980 347 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 MRPS10P1-201ENST00000448483 130 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 HSPE1P13-201ENST00000451143 297 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.83□□□□□ -2.28
SEMA3DO95025 CYCSP23-201ENST00000519781 313 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 AL590705.4-201ENST00000532209 134 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.83□□□□□ -2.28
SEMA3DO95025 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 AL513423.1-201ENST00000621695 132 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 AL133216.2-202ENST00000634512 349 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 AC100810.6-201ENST00000638068 285 ntBASIC0.83□□□□□ -2.28
SEMA3DO95025 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SEMA3DO95025 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SEMA3DO95025 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
SEMA3DO95025 RNU6-595P-201ENST00000363944 107 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 RNU4-76P-201ENST00000364509 141 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 Y_RNA.402-201ENST00000383972 102 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 RNU6-831P-201ENST00000384548 107 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 Y_RNA.554-201ENST00000384672 102 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 MIR660-201ENST00000385235 97 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SEMA3DO95025 USP9YP30-201ENST00000430729 455 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 RPS4XP11-201ENST00000446897 772 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.82□□□□□ -2.28
SEMA3DO95025 RNU6-864P-201ENST00000516256 108 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 RNU6-1314P-201ENST00000517139 104 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.82□□□□□ -2.28
SEMA3DO95025 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
SEMA3DO95025 ZNF299P-201ENST00000406845 1804 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 Y_RNA.191-201ENST00000363972 113 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 RNU6-281P-201ENST00000384212 103 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 RNU6-842P-201ENST00000384269 107 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 AC016907.1-201ENST00000419483 435 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 RAB28P5-201ENST00000427490 651 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 CALM2P4-201ENST00000430810 426 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.81□□□□□ -2.28
SEMA3DO95025 AC048334.1-201ENST00000477975 159 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 SNORA31.2-201ENST00000516019 134 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 RNA5SP168-201ENST00000516642 112 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 RNA5SP102-201ENST00000516865 106 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 SNORA70.22-201ENST00000517160 124 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 AL513534.2-201ENST00000603836 250 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 MIR6079-201ENST00000635807 62 ntBASIC0.81□□□□□ -2.28
SEMA3DO95025 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
SEMA3DO95025 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.8□□□□□ -2.28
SEMA3DO95025 Y_RNA.106-201ENST00000363189 100 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU4-24P-201ENST00000364565 139 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU6-596P-201ENST00000365395 98 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 SNORA20B-201ENST00000384220 132 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU11-5P-201ENST00000391216 129 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 AL355796.1-201ENST00000406706 323 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU6-373P-201ENST00000411247 98 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 Z83846.1-201ENST00000446798 265 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 AC093850.1-201ENST00000454121 251 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU7-94P-201ENST00000459576 63 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 AC093534.1-201ENST00000504977 132 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 AC010598.1-201ENST00000510378 103 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU6-1114P-201ENST00000516022 107 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU6-947P-201ENST00000516264 106 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 Y_RNA.683-201ENST00000516508 93 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 SCARNA16.2-201ENST00000516520 172 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
SEMA3DO95025 CBX3P8-201ENST00000532412 525 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms