Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RNU6-514P-201ENST00000384208 107 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 MIR520C-201ENST00000385005 87 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.15□□□□□ -2.43
PCF11O94913 GMFBP1-201ENST00000467831 427 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 MIR4431-201ENST00000579990 94 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 MIR4438-201ENST00000585271 93 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 AL607023.1-201ENST00000620045 248 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 MIR198-201ENST00000637333 62 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 MIR18A-201ENST00000362310 71 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 MT-TQ-201ENST00000387372 72 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 USP9YP25-201ENST00000457708 443 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
PCF11O94913 RNU2-69P-201ENST00000516061 100 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 SCARNA24.1-201ENST00000516465 137 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 RNU6-341P-201ENST00000516973 96 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 AC090572.1-201ENST00000519251 160 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 AC002044.1-201ENST00000606707 158 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 RNU6-94P-201ENST00000607728 107 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 AC008873.1-201ENST00000625051 138 ntBASIC-0.15□□□□□ -2.43
PCF11O94913 SNORD115-41-201ENST00000363608 82 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 RNU6-501P-201ENST00000364072 100 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 RNU6-245P-201ENST00000384020 107 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 MIR520F-201ENST00000384824 87 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 MIR454-201ENST00000390180 115 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 SNORA40.8-201ENST00000411034 126 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 SNORD71-201ENST00000411292 86 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.16□□□□□ -2.44
PCF11O94913 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 RNU6-410P-201ENST00000517006 107 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 AP003168.1-201ENST00000530091 307 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 MIR4290-201ENST00000583807 95 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 MIR4999-201ENST00000585029 91 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 SNORD11B-201ENST00000607707 90 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 AC027807.2-201ENST00000616099 408 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 AC027279.3-201ENST00000625055 122 ntBASIC-0.16□□□□□ -2.44
PCF11O94913 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.17□□□□□ -2.44
PCF11O94913 RNY1P8-201ENST00000383970 114 ntBASIC-0.17□□□□□ -2.44
PCF11O94913 MIR224-201ENST00000384889 81 ntBASIC-0.17□□□□□ -2.44
PCF11O94913 MIR573-201ENST00000384964 99 ntBASIC-0.17□□□□□ -2.44
PCF11O94913 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
PCF11O94913 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.17□□□□□ -2.44
PCF11O94913 AC074198.2-201ENST00000508153 258 ntBASIC-0.17□□□□□ -2.44
PCF11O94913 Vault.3-201ENST00000516676 95 ntBASIC-0.17□□□□□ -2.44
PCF11O94913 AP002004.2-201ENST00000531656 154 ntBASIC-0.17□□□□□ -2.44
PCF11O94913 SNORA25.3-201ENST00000363205 127 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 SNORD65B-201ENST00000459126 73 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 AC093534.1-201ENST00000504977 132 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 RNU6-612P-201ENST00000516909 102 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 RNU6-85P-201ENST00000605989 107 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 AC104010.1-201ENST00000616889 150 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 AC009159.2-201ENST00000617603 606 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 MTND4P9-201ENST00000507819 1346 ntBASIC-0.18□□□□□ -2.44
PCF11O94913 MIRLET7C-201ENST00000362160 84 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNU6-266P-201ENST00000364225 107 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNU6-815P-201ENST00000384080 113 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNY3P5-201ENST00000384127 102 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNU6-636P-201ENST00000384598 107 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.19□□□□□ -2.44
PCF11O94913 AL139396.1-201ENST00000421137 167 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AC073261.1-201ENST00000429409 121 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.19□□□□□ -2.44
PCF11O94913 AL512286.1-201ENST00000439244 400 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 MTCO3P10-201ENST00000455912 772 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 SCARNA18-201ENST00000459004 134 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 HSPE1P23-201ENST00000509838 286 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.19□□□□□ -2.44
PCF11O94913 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
PCF11O94913 AC027288.2-201ENST00000553028 243 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 MTCO3P23-201ENST00000561363 289 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AL139418.1-201ENST00000613613 177 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AC078938.1-201ENST00000620993 318 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AL138960.2-201ENST00000625145 535 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AC006927.3-201ENST00000638789 384 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AC005592.1-201ENST00000566527 1640 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 ZNF204P-201ENST00000416749 2397 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 RNU6-679P-201ENST00000391003 106 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.19□□□□□ -2.44
PCF11O94913 USP9YP29-201ENST00000445112 563 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.19□□□□□ -2.44
PCF11O94913 SNORA40.12-201ENST00000516329 111 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 AC104383.1-201ENST00000530297 370 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 FRG2DP-202ENST00000566967 323 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 MIR1295B-201ENST00000636144 60 ntBASIC-0.19□□□□□ -2.44
PCF11O94913 MIR526A1-201ENST00000384897 85 ntBASIC-0.2□□□□□ -2.44
PCF11O94913 AL365184.2-201ENST00000431139 435 ntBASIC-0.2□□□□□ -2.44
PCF11O94913 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.2□□□□□ -2.44
PCF11O94913 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.2□□□□□ -2.44
PCF11O94913 RNU1-117P-201ENST00000517041 158 ntBASIC-0.2□□□□□ -2.44
PCF11O94913 MTND2P32-201ENST00000521584 1038 ntBASIC-0.2□□□□□ -2.44
PCF11O94913 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.2□□□□□ -2.44
PCF11O94913 RNU6-660P-201ENST00000364566 109 ntBASIC-0.21□□□□□ -2.44
PCF11O94913 SNORA2B-201ENST00000384583 137 ntBASIC-0.21□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms